Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq272 154 3e-32 >seq272 Length=795643 Score = 154 bits (170), Expect = 3e-32 Identities = 173/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGG-CATGAACGCTGAACT 230468 || ||||||||| | || ||| |||| || |||| | ||| ||||||||| | || Sbjct 63370 GAGAAGGAGTTCTTGACCGAGGCTCTTCCTTG-CGCCATGCTGGGCATGAACGCCAACCT 63428 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 |||| ||||| ||||| || || |||||||| || | ||||| || ||| |||| || Sbjct 63429 TATGAAGCAGTATATCGAGTTTGTTGCCGACCGTCTTCTGGTTGCTCTCGGTAACGACAA 63488 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 |||||||| || | |||||||| | || |||||| |||||| ||| || ||||| Sbjct 63489 GGTGTACAAGTCGACTAACCCCTTCGACTTCATGGAGAACATTTCCCTTGGCGGCAAGAC 63548 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||||||| ||||| ||| ||||||| |||| | | ||||| ||| Sbjct 63549 CAACTTCTTCGAGAAGCGCGTCGGTGACTACCAGAAGGCCGGTGTCATG 63597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817562149250