Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq181 192 7e-44 >seq181 Length=2234860 Score = 192 bits (212), Expect = 7e-44 Identities = 255/353 (72%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||||||||| ||||| ||||| ||||| |||| ||| Sbjct 229321 ACGTAGAACTGGGCGAACATGTGGCAGGGGGGCAGCACCATGTTGGGCATGTCCTTGGGG 229262 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATC 145986 ||||| || | |||| | ||| || ||| |||||| | || | || Sbjct 229261 TTCCACGCCGACAGGATCA---TCCGGCGGTCGTAAGGGTTCGTGCGGAGTTTGTGGATG 229205 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046 || || ||||||||| |||||||| || ||| || ||||||||||| |||||| || Sbjct 229204 AGCTCGGCGAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGTCTTGGAGTCGACGTACTCG 229145 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 ||||| ||||||| ||||||||||||||||||||| |||||||| || ||| | || Sbjct 229144 GCCCCAAAGTGCCGCCACTGGAACCCGTAGACGGGGCCCAGGTCACCCACCTCGCGATGG 229085 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 ||| ||| | | ||||||| || || ||||||||| |||||||||||||||||||| Sbjct 229084 GTCAGGCCGAGCTTGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCC 229025 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 | || |||| | || ||| ||| |||||||||||| ||||| Sbjct 229024 TGCTCGCTGAGCGCGAGCGACGATGTGTTGCCCTGGATGAACCAGAGGAGCTC 228972 Score = 143 bits (158), Expect = 3e-29 Identities = 159/207 (77%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 145647 GGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705 ||| || |||||||| ||| | || ||||| | | || | | ||||||| ||||| Sbjct 229604 GGGGAACGGCCGGGG-CTCGCGCTCCAGCTGCTCCCTGAGCGCGTTGACGTGGTCGAGGT 229546 Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGA-AGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 ||||||||||||| |||| ||||||| ||| | | ||||| | | | | | || |||| Sbjct 229545 AGACGTGCGCGTCGCCCATGACGTGGGTGAGACTGCCCGG-CACCATGTCGCAGACGTGG 229487 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 |||| ||||| |||||||| | ||||||||| |||||||| || || ||||| ||||| Sbjct 229486 GCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCCAGGCCCATA 229427 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || | || |||||||||||||||||| Sbjct 229426 TCGCAGGAACGCTGGTACAGCTGGCAG 229400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073296419000