Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq272 86.0 6e-12 >seq272 Length=795643 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || |||||||| |||| || ||||| | Sbjct 63582 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAAATGTTCTC 63523 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | ||| | |||||||| || | | | || || Sbjct 63522 CATGAAGTCGAAGGGGTTAGTCGACTTGTACACCTTGTCGTTACCGAGAGCAACCAGAAG 63463 Query 119762 TCGATCTGCCACAAACTCGATGTATT--CGCACATGGATTGCGAATTCATGCCCAACATA 119819 || || || ||||||||||| || | || | || | ||| |||||||||| ||| Sbjct 63462 ACGGTCGGCAACAAACTCGATATACTGCTTCATAAGGTTGGCG--TTCATGCCCAGCATG 63405 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 ||| || | ||| | ||| ||||| ||||| |||||| ||| || || Sbjct 63404 GCGCAAGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGGTGACGGCGTC 63355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659557942000