Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq272 122 1e-22 >seq272 Length=795643 Score = 122 bits (134), Expect = 1e-22 Identities = 329/492 (67%), Gaps = 21/492 (4%) Strand=Plus/Minus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 ||||||||| |||||||||||||| | | ||| || |||||||| |||| ||||| Sbjct 63564 CTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAAATGTTCTCCATGAAGTCGAAGGGGTT 63505 Query 159709 CTTC-ACGTG-ATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAAT 159766 || || || | | | ||| | |||||||| |||| | | ||| || ||||| Sbjct 63504 AGTCGACTTGTACACCTTGTCGTTA--CCGAGAGCAACCAGAAGACGGTCGGCAACAAAC 63447 Query 159767 TCGATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCA--GCCTAACGGGGAGCGCT 159823 ||||| || || | ||| | | ||| || ||||||| || || || || || Sbjct 63446 TCGATATA-CTGCTTCATAAGGTTGGCGTTCATGCCCAGCATGGCGCAA--GGAAGAGCC 63390 Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT-CTGCGAGACACGTTC 159882 || | || |||||||||||||| ||| || || || | || || | || | | Sbjct 63389 TCGGTCAAGAACTCCTTCTCAATGGTGACGGCGTCAGTGATGATGCTCTCAATGACCTCC 63330 Query 159883 GTACCCCGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTG 159939 | |||||| | | ||| ||| || ||||| || ||||| ||| Sbjct 63329 TT------GCTTGCGCGAT-TGTTTAGGTGGGAGTGGAGTAGGCAAGCGAAGTCAGTGTG 63277 Query 159940 CAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACG 159999 || |||||||| || ||||| | ||||||||| | | |||| || ||||| | ||||| Sbjct 63276 AAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACCACG 63217 Query 160000 CGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGC 160059 | || | ||| || |||| || ||||||||||| || ||||| ||||| ||||| || Sbjct 63216 CTTCTTCAACCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAGATGCCCTCAACGGCAGC 63157 Query 160060 AAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCA 160119 || || || || | || | | || | || || |||| || |||| | | ||||| Sbjct 63156 GAAGGCAACAAGACGCTGAGCGAATGTGGATTTCTTGTCCTGAATCCAGCGAATTGCCCA 63097 Query 160120 TTCAGCCTTCTT 160131 || |||||||| Sbjct 63096 CTCGGCCTTCTT 63085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150478766000