Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq72 215 6e-51 >seq72 Length=1307737 Score = 215 bits (238), Expect = 6e-51 Identities = 1017/1591 (64%), Gaps = 51/1591 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA-TACACTTTTG 109565 || ||||| || || ||||| ||| ||||| || ||||| | | | | || || Sbjct 1153862 GATTGAGATTGGTCAATGAAAGCACCTCGATCGGCGGCCATCTGCACAACTTGACGTTGA 1153803 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 | ||| |||||||| |||||||| | | ||||| ||||| || |||| ||||| Sbjct 1153802 GA-AATCTCCCAGACGGTCTTGTAGAGAGCCTTGAGGTCATCAGGGATGTTGGGAATGTT 1153744 Query 109626 TTGAATAGAGCCACCAGCCTTCACCATGA---GATCCTTCATCTCTTTCGACCAGAGACC 109682 ||| || || ||| || | |||| | | |||||| | | ||||| | || Sbjct 1153743 TTGGATCGA---ACCTTGCTCAGCAATGATTCGGTTCTTCATGGCATCGGACCACAAGCC 1153687 Query 109683 GACCTTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCACCAGCAAGT 109740 | || ||||| | ||||| | | ||||| || || || ||||| || Sbjct 1153686 CAACTCAACAAGATCTTT--CAAGAGCCAGGGGTTGACGACCTGGAACTCTCCAGCCAGA 1153629 Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800 |||||| ||||||||| | |||||||| ||||| || ||||||||||||| ||| Sbjct 1153628 ACACGTCGGGAGTAGATGTTTGATGTGTAGGGCTCGAAGCATTCATTGTTGCCTAAGATC 1153569 Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTC 109860 || | || || || ||||| || |||| ||| |||||||| |||| ||| | | | Sbjct 1153568 TGAGAGGTACTGGCGGTAGGCATAGGGGCCACGAGCAGACTGTTGCGGATACCGTGCTCC 1153509 Query 109861 TTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCC 109920 || | | |||| || | | ||||| || || | || | | || || | Sbjct 1153508 TTGATCTGCTCTCGAAGGGTCTCCCACTCCCAAAGGTCAGAGG-----GGGTGAC-ATTC 1153455 Query 109921 CACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGAC 109980 ||||| || ||||| | ||||| | ||| || || |||||||| ||| ||| | Sbjct 1153454 CACATGTCGAACTGAAGGATTCCCTCTGAAGCTGGGGATCCCTTGAAGGTCTGGTAGGGA 1153395 Query 109981 CCCTCAACCTCGGCCAACTCGGATGAAGCCTCTA-GTGCCGCATGATACATAGTCTCAAA 110039 || | ||| || | || ||| | | || | || ||||| || |||||||| || Sbjct 1153394 CCTTGCTCCTTCGCGAGTTCC-ATGGACTCAGTAAGGGCGGCATGGTAGATAGTCTCGAA 1153336 Query 110040 AATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA----CAAAGAA 110095 || || || | | |||| ||| | ||||| || | | | ||||| Sbjct 1153335 GATCTGCTTGTTTAGCTGACGAGCCTCAGGCGACTCGAAAGGCATGCGTAGAGCCAAGAA 1153276 Query 110096 TAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGC 110155 | |||| || |||||||||||||| ||||||||||| ||||| |||||| | Sbjct 1153275 TG----CATCTGCAAGACCCTGAACACCAAGACCAATGGGTCGATGACGCATGTTGCTGT 1153220 Query 110156 GTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCA 110215 || || | |||||||| ||||| ||||||| || || || || | | Sbjct 1153219 TGCGTGCCTCCTGAACGGGGTAGTAGTTGACATCGATGATACGGTTCAGGTTACGCACGA 1153160 Query 110216 CAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTC-TCCTTATTGACA 110274 | | || | ||| ||||| || | | | | | | | || || | || || Sbjct 1153159 TAACCCGTGTAACTTCGTGGAGCTTCTTAAAGTTGTA-GCAGCCCTCGTCGTAATCAACG 1153101 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || ||| ||||| | || || || ||||| |||| | ||| || || |||| Sbjct 1153100 TAGGCGGGCAGAGCCAGCGAAGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCAGTAT 1153041 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 || | ||| || || || | ||||| || || ||||| ||||||||| || Sbjct 1153040 TCAATAATCTCAGTGCAAAGATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTC 1152981 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 || |||||| |||||||| || |||||| | ||| ||||||| || || || | | | Sbjct 1152980 TTACGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCG 1152921 Query 110455 AGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT-TG-CGTTAGCGAGACCTTCCTCC 110511 ||||| | | ||| | | || | ||| ||| || || || | | |||| |||| | Sbjct 1152920 AGAATCGAGTACCACAGCTTCTG-GGCACGGATCGTCTGACG--ACCACGACCCTCCTTC 1152864 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 || ||||| ||| | | ||||||| |||| ||||| |||| || || | Sbjct 1152863 TCATACTTCTCGTAAAGGGCCTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCAC 1152804 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | || || || | ||| | ||| || | || |||||| | ||||||||| || ||| Sbjct 1152803 TCGTTAGGGCACATGAGAGTCCAGTTCTCGTTCTTCTCAACGCGCTTCATGAAGAGATCA 1152744 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||| | || ||| ||||| || ||| |||||| | || || || Sbjct 1152743 GGGATCCATAGAGCTAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTT 1152684 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 || || |||| || || | || ||| |||||||| || |||||||||| ||| | || Sbjct 1152683 CGAAGATCCAGGAACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCA 1152624 Query 110752 CCCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || | | || || |||| | |||||| | || ||| ||||| || | Sbjct 1152623 CC---AGGGCGCTTGTTGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGC 1152567 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| || || ||||||| |||| || || || || ||| || | ||| Sbjct 1152566 AGCATGGGGATGATTCCATTGGATGTGCCGTTGGTTCCGGCAATGTACGAGCCTGTAGCA 1152507 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924 |||||| ||| | | | ||| ||||| || ||| ||| || ||||| || Sbjct 1152506 CGAATGCGGTGAACGTTGAGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTC 1152447 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| ||| | || ||||| ||||| || |||| | | | || ||||| || Sbjct 1152446 T-TGAGAGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGA 1152388 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 || | ||||| | || || || ||||||||||| || || | |||||| | | || Sbjct 1152387 TGAGAGCTGAGCCTGGGGGGTACCGGCATTGAAGAGAGTGGGAGAAGCATGA--GTAAAG 1152330 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTCGA 111073 | |||| |||||| | |||||| || |||| Sbjct 1152329 AACTTGTTGGACATGTAGTTGTAGGTCTCGA 1152299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972502955000