Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq72 232 1e-55 seq272 131 3e-25 >seq72 Length=1307737 Score = 232 bits (256), Expect = 1e-55 Identities = 903/1397 (65%), Gaps = 57/1397 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | ||| | |||||| |||||| Sbjct 1153658 GGGTTGACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTTGATGTGTAG 1153599 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || || ||||| || | ||||| | || ||||| || ||||| || ||| Sbjct 1153598 GGCTCGAAGCATTCATTGTTGCCTAAGATCTGAGAGGTACTGGCGGTAGGCATAGGGGCC 1153539 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGC-TCTGCCCAGTC 213085 || || |||||||| | | |||||||| ||| | ||||| ||| |||| || Sbjct 1153538 ACGAGCAGACTGTTGCGGATACCGTGCTCCTTGATCTGCTCTCGAAGGGTCT-CCCACTC 1153480 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT- 213144 ||| | |||| || | || ||||||||||| ||||| | ||| || | Sbjct 1153479 CCAAAGGTCAGAGGGGG---------TGACATTCCACATGTCGAACTGAAGGATTCCCTC 1153429 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || |||| | |||| | | | |||||| || |||||||| || || || || Sbjct 1153428 TGAAGCTGGGGAT-CCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTCCATGG 1153370 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 || | ||||| || | |||||| || || || |||| | |||| |||| |||| Sbjct 1153369 ACTCAGTAAGGGCGGCATGGTAGATAGTCTCGAAGATCTGCTTGTTTAGCTGACGAGCCT 1153310 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTG------GAACACATCAGCCAGCCCCTGGA 213318 | || ||| ||| ||||| |||| | ||| |||| || || ||||| | Sbjct 1153309 CAGGCGACTCGAAAGGCAT------GCGTAGAGCCAAGAATGCATCTGCAAGACCCTGAA 1153256 Query 213319 CCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAA 213377 | || | || ||||||| || | || ||| ||| | || ||||| | |||||| Sbjct 1153255 CACCAAGACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGC-CTCCTGAACGGGGTAG 1153197 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 ||||| |||||||| ||| ||||| || | || || || | | || Sbjct 1153196 TAGTTGACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTGGAGC 1153137 Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACT---CAGGCAGGGCGATGCTG 213494 | || ||| | | ||||| |||| | ||| | | ||||| || | Sbjct 1153136 TTCTTAAAGTTGTA---GCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGAA 1153080 Query 213495 GCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||||||||||||| || ||||| | | ||| | ||| || || ||||| ||||| || Sbjct 1153079 GCCAGGTTGCAAACAGCAACCTCATCGGGAG-CGCAGTATTCAATAATCTCAGTGCAAAG 1153021 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTT 213613 ||| || ||||| || |||||||||| ||||| ||| |||| || |||||| Sbjct 1153020 ATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTT 1152961 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 ||| |||||| ||||| || ||||| |||| | || ||| | ||| || | Sbjct 1152960 GTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGAATCGAGTACCACAGCTT 1152901 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCT 213732 | ||| || | | ||||| | || | | ||| |||| ||||| || Sbjct 1152900 CTGGGCACGGATC----GTCTGACGACCACGACCCTCCTTCTCATACTTCTCGTAAAGGG 1152845 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACAT 213787 | | || || | ||| || | ||| || || || |||| | || || ||||| Sbjct 1152844 CCTCAAACTCCTCGCCGTAG---CAGTC-AG-CCAGGCCAGGGCACTCGTTAGGGCACAT 1152790 Query 213788 GAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 ||| |||||| | ||| | |||| || | || |||||| || || |||| ||| || | Sbjct 1152789 GAGAGTCCAGTTCTCGTTCTTCTCA-ACGCGCTTCATGAAGAGATCAGGGATCCATAGAG 1152731 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 | ||||||||| | | | |||| ||| ||| || || || ||||| || | Sbjct 1152730 CTAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGATCCAGGA 1152671 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG- 213965 | || |||| || | |||||| ||||| | ||||| |||||||| || || | |||| Sbjct 1152670 ACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCAGGGCGCTTGT 1152611 Query 213966 --CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 || ||||| || || ||||| ||||||| | ||||| | ||| | | | Sbjct 1152610 TGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTC 1152551 Query 214024 CGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082 | ||||| ||| ||||||||||| || || |||||||| | || | | | | | | Sbjct 1152550 CATTGGA-TGTGCCGTTGGTTCCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACG 1152492 Query 214083 GAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATG 214142 ||| || || || || || ||| ||||||||||| ||| | | | ||| || | Sbjct 1152491 TTGAGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAG 1152432 Query 214143 ATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG 214202 || ||| | ||||||||||| | | | | | |||||| |||||||| | | | Sbjct 1152431 ATACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGG 1152372 Query 214203 GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGC 214262 | | || | ||||| || ||||| ||||| | | |||||||| || | | Sbjct 1152371 GGGGTACCGGCATTGAAGAGAGTGGGAGAAGCATGAGTAAAGAACTTGTTGGACATGTAG 1152312 Query 214263 CTGTAGGTCTCCAGGAC 214279 |||||||||| | ||| Sbjct 1152311 TTGTAGGTCTCGATGAC 1152295 >seq272 Length=795643 Score = 131 bits (144), Expect = 3e-25 Identities = 337/506 (67%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | || |||||||| Sbjct 63582 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAAATGTTCTC 63523 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCA 47957 ||||||| ||||||||| | | || |||||| |||| || | |||| | Sbjct 63522 CATGAAGTCGAAGGGGTTAGTCGACTTGTACACCT-TGTCGTTACCGAGAGCAACCAGAA 63464 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || ||||||| || | ||| ||| || ||||||||| | | || Sbjct 63463 GACGGTCGGCAACAAACTCGATATACTGCTTCATAAGGTTGGCGTTCATGCCCAGCATGG 63404 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 || | ||||| || | ||||||||||| || ||||| || | || Sbjct 63403 CGCAAGGAAGAGCCTCGGTCAAGAACTCCTTCTCAATGGTGACGGCGTCAGTGATGATGC 63344 Query 48078 GCTTAACGCGGGACTC---TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || || | || || | | ||||| ||||| || | ||| | ||| | Sbjct 63343 TCTCAATGACCTCCTTGCTTGCGCGATTGTTT---AGGTG---GGAGTGGAGTAGGCAAG 63290 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | ||||| |||| | || ||||| ||| ||| ||| ||||||||||| |||||||| Sbjct 63289 CGAAGTCAGTGTGAAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTGAGACCAG 63230 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | || | || || | |||||| || | ||||||| || ||||||||||| Sbjct 63229 GCATCAGACCACGCTTCTTCAACCAGAAGATGGAAGCGAAAGCACCGCTGAAGAAGATGC 63170 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGT-CTGAGATC 48313 |||| || || ||||| || || | || |||| | | ||||||| |||| ||| Sbjct 63169 CCTCAACGGCAGCGAAGGCAACAAGACGCTGAGCGAATGTGGATTTCTTGTCCTGA-ATC 63111 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||| || ||||| || |||||||| Sbjct 63110 CAGCGAATTGCCCACTCGGCCTTCTT 63085 Score = 105 bits (116), Expect = 1e-17 Identities = 176/251 (70%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| || |||||| | Sbjct 62943 TCTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCACCGAGCCTCAGGAA 62884 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | | ||| | ||| | ||| ||||||||||| || ||||| || |||| Sbjct 62883 TCTGGACCTCAGCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATGCCATCAGAGGCAG 62824 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCG---TTGTGGGTGAGAGCATTCC 48605 | ||||||||||| || || | ||| | ||||||| | || || | | | || Sbjct 62823 CGAAGAAGGCAAGAACGTGAGAGACGAAGTAGCGCTCGTCATCGTTCATGCGGGTGTGCC 62764 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC-GAGTGCT 48664 || | || | || ||| ||| || | ||| || |||||||||| || || |||| Sbjct 62763 AGTCGTGGAGATCCTTGGACAGATCGATTTCCTCAGCAGTCCAGAAAGAAGCTTCGTGC- 62705 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 62704 TTCTTGTACAT 62694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527269024000