Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq72 95.1 6e-15 >seq72 Length=1307737 Score = 95.1 bits (104), Expect = 6e-15 Identities = 286/438 (65%), Gaps = 4/438 (1%) Strand=Plus/Minus Query 25921 CTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCT 25980 |||||| || ||| || | ||| || ||||| | || || | |||| || | Sbjct 1152768 CTCAACGCGCTTCATGAAGAGATCAGGGATCCATAGAGCTAGGAACAGGTCTCGTGCACG 1152709 Query 25981 CATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 || ||||| ||||||||||||||| ||||| | ||| || || | ||| |||||||| Sbjct 1152708 GATCTCTTCCTTTCCGTGATTCTTTCGAAGATCCAGGAACTCGAAGACATCAGAGTGCCA 1152649 Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100 || || | |||||||||||| ||| | || ||||| ||||| || ||||| Sbjct 1152648 GGGCTCGAGATAGATAGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGATCAACATATCT 1152589 Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160 ||||| | ||||| ||| || ||| || | | |||| | || ||||| || | Sbjct 1152588 GGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTGGATGTGCCGTTGGTTCC 1152529 Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220 ||| | || ||||| | | ||| |||| | | | |||||| || || ||| Sbjct 1152528 GGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGTTGAGACCGATACCTCCTGCCAT 1152469 Query 26221 TTTTGAAATAGCTGCACA-ATC-TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCT 26278 ||||| || ||||| || ||| | |||||| | || || | ||||| ||| | Sbjct 1152468 CTTTGAGATCATGGCACAGGTCTTGAGA--GTATCGTAGATACCGTCAATGCTGTCATCC 1152411 Query 26279 TTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAAT 26338 ||||| | | | || || || || | || | || | || || | ||| || | Sbjct 1152410 TTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGGTACCGGCATTGAAGAGA 1152351 Query 26339 GTCGGTGTAGCATGAGTA 26356 || || | |||||||||| Sbjct 1152350 GTGGGAGAAGCATGAGTA 1152333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038535135625