Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq102 87.8 1e-11 >seq102 Length=1283250 Score = 87.8 bits (96), Expect = 1e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | ||||||||| | |||||| ||||| |||| || | || ||| Sbjct 220770 GAATTCTTCTTCCACGCCATGGCTGGTAGAGAAGGTCTTATTGATACTGCAGTCAAGACT 220829 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGAT 435240 ||||| ||||||||||||||| | || |||||| || |||||| Sbjct 220830 GCTGAGACTGGTTATATTCAACGTCGTCTCGTCAAGGCTCTCGAAGAT 220877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740607079507350