Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq181 140 4e-28 >seq181 Length=2234860 Score = 140 bits (154), Expect = 4e-28 Identities = 241/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | |||||||| || |||||| ||||| ||||| |||| |||| Sbjct 229321 ACGTAGAACTGGGCGAACATGTGGCAGGGGGGCAGCACCATGTTGGGCATGTCCTTGGGG 229262 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| ||||| | | || ||| | | | |||||| | | | | ||| | | Sbjct 229261 TTCCACGCCGACAGGATCATCCGGCGGTCGTAAGGGTTCGTGCGGAGTTTGTGGATGAGC 229202 Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285 |||||||| ||||||||||| ||||| ||| | |||| |||||| |||| Sbjct 229201 TCGGCGAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGTCTTGGAGTCGACGTACTCGGCC 229142 Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAG 147345 |||||||||| ||||||||| ||||| || || |||||||| || || | || | Sbjct 229141 CCAAAGTGCCGCCACTGGAACCCGTAGACGGGGCCCAGGTCACCCACCTCGCGATGGGTC 229082 Query 147346 AAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 | ||| | | ||| |||||| | ||||||| | |||||||||| || |||| Sbjct 229081 AGGCCGAGCTTGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCCTGC 229022 Query 147406 GCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 || |||| | || ||| |||| ||||||||||||| ||||| Sbjct 229021 TCGCTGAGCGCGAGCGACGATGTGTTGCCCTGGATGAACCAGAGGAGCTC 228972 Score = 122 bits (134), Expect = 1e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| |||| |||||| || ||||| | | ||||||| | || | | ||| Sbjct 229615 ATCTCCAGCTCGGGGAACGGCCGGGGCTCGCGCTCCAGCTGCTCCCTGAGCGCGTTGACG 229556 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| |||||||||||||||||| |||| | ||| | |||||| | | || Sbjct 229555 TGGTCGAGGTAGACGTGCGCGTCGCCCATGACGTGGGTGAGACTGCCCGGCACCATGTCG 229496 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 |||||||| | ||||| || ||||||| ||||||||| |||||||| ||||| ||| Sbjct 229495 CAGACGTGGGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCC 229436 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||||||| || | || | ||||||||||||||| Sbjct 229435 AGGCCCATATCGCAGGAACGCTGGTACAGCTGGCA 229401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484535540000