Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq181 105 5e-18 >seq181 Length=2234860 Score = 105 bits (116), Expect = 5e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670 ||| || || | |||||| | ||| ||||| ||| |||| | |||||||| ||||| Sbjct 229604 GGGGAACGGCCGGGGCTCGCGCTCCAGCTGCTCCCTGAGCGCGTTGACGTGGTCGAGGTA 229545 Query 29671 GACGTGAGCATCTCCCAGGGTGTGGACAA-ACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729 |||||| || || |||| | |||| | ||| ||||| | | || |||||| | Sbjct 229544 GACGTGCGCGTCGCCCATGACGTGGGTGAGACTG-CCCGGCACCATGTCGCAGACGTGGG 229486 Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789 | | ||||| ||| || || | ||||||||||||||| || || || || || ||||| | Sbjct 229485 CGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCCAGGCCCATAT 229426 Query 29790 CCCCTGACCTCTGGTAGAGCTGGCA 29814 | | || | |||||| |||||||| Sbjct 229425 CGCAGGAACGCTGGTACAGCTGGCA 229401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406160848695850