Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F000963775.2_202015-04-21] 475 sequences; 55,416,396 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq72 214 3e-50 >seq72 Length=1307737 Score = 214 bits (236), Expect = 3e-50 Identities = 1142/1794 (64%), Gaps = 53/1794 (3%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| || | | || | | ||||| ||||||||||| ||||| || || Sbjct 1153994 GTGAACTGAATAGGGGCCGCAGCAGCCTGAGTACGAAGATAGTACATGCCAGTCTTAAGC 1153935 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG--AATAACTCGGATCGGCTA 75494 ||||| |||| || || ||||| || || | ||| | | | ||||| | Sbjct 1153934 CCCAGTTTCCAGCCAGCAAAGTGCATACTGGTAATCTTGCCCATTGAG--GGATCCTTCA 1153877 Query 75495 TATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTA 75554 |||| || || | || ||| ||| || |||||||| |||| ||| || ||||| | | Sbjct 1153876 TATGGATGTTGAGAGATTGAGATTGGTCAATGAAAGCACCTCGATCGGCGGCCATCTGCA 1153817 Query 75555 TAA-TGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGA 75613 || | | | || ||| ||| ||||| | || ||| | | |||| ||||| || Sbjct 1153816 CAACTTGACGTT-GAGAAATCTCCCAGACGGTCTTGTAGAGAGCCTTGAGGTCATCAGGG 1153758 Query 75614 AGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCA 75670 | || | | ||||| || || || |||| || ||| ||||| || |||| Sbjct 1153757 ATGTTGGGAATGTTTTGGATCGAACCTTGCTCAGCAATGATTCGGTTCTTCATGGCATCG 1153698 Query 75671 TTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCT 75730 |||||| ||| | | || | | ||| || || || | || || ||| Sbjct 1153697 GACCACAAGCCCAACTCAACAAGATCTTTCAAGAGCCAGGGGTTGACGACCTGGAACTCT 1153638 Query 75731 CCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 75790 |||| || || | ||| | ||| || || || || || || | |||||||||| Sbjct 1153637 CCAGCCAGAACACGTCGGGAGTAGATGTTTGATGTGTAGGGCTCGAAGCATTCATTGTTG 1153578 Query 75791 CCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGA 75850 || || || |||| || || || |||||||| ||||| | | ||| || | || | Sbjct 1153577 CCTAAGATCTGAGAGGTACTGGCGGTAGGCATAGGGGCCACGAGCAGACTGTTGCGGATA 1153518 Query 75851 CCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAA 75908 || ||| || |||| | ||| || | ||| |||||||| || || || | Sbjct 1153517 CC--GTGCTCCTTGATCTGCTCTCGAAGGGTCTCCCACTCCCAAAGGTCAGAGGGGGTGA 1153460 Query 75909 CATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGT 75968 ||| ||| | ||| | || || ||||| | ||| ||||| || | || | || Sbjct 1153459 CATTCCACATGTCGAACTGAAGGATTCCCTCTGAAGCTGGGGATCCCTTGAAGGTCTGGT 1153400 Query 75969 AAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTC--TAACG-CACCGTAATAAATTG 76025 | | || | || | || ||||| || | | ||| ||| | | | | || || | Sbjct 1153399 AGGGACCTTGCTCCTTCGCGAGTTC-CA--TGGACTCAGTAAGGGCGGCATGGTAGATAG 1153343 Query 76026 TTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAA 76085 | ||||| |||| ||| || || | | || ||| | || ||||| ||| | Sbjct 1153342 TCTCGAAGATCTGCTTGTTTAGCTGACGAGCCTCAGGCGACTCGAAAGGCATGCGTAGAG 1153283 Query 76086 GAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGG 76145 | ||||||||||| || |||||||| |||| |||||| |||| ||| | | | ||| Sbjct 1153282 CCAAGAATGCATCTGCAAGACCCTGAACACCAAGACCAATGGGTCGATGACGCATGTTGC 1153223 Query 76146 AAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA 76205 | || || ||| ||||| || || | ||| || || || || || | | Sbjct 1153222 TGTTGCGTGCCTCCTGAACGGGGTAGTAGTTGACATCGATGATACGGTTCAGGTTACGCA 1153163 Query 76206 CAACTAC---TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACAA 76262 | | || | |||| ||| || || ||| | | || || || || Sbjct 1153162 CGATAACCCGTGTAACTTCGTGG---AGCTTCTTAAAGTTGTAGCAGCCCTCG-TCGTAA 1153107 Query 76263 ACATATTA-------AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315 || || ||||| | || || || || ||||| || ||||||| | | | Sbjct 1153106 TCAACGTAGGCGGGCAGAGCCAGCGAAGCCAGGTTGCAAACAGCAACCTCATCGGGAGCG 1153047 Query 76316 GCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375 |||| || ||||| ||||| ||||| | |||||| || || || | ||| Sbjct 1153046 CAGTATTCAATAATCTCAGTGCAAAGATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGG 1152987 Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435 |||||||| ||| || | ||||| ||||| | || || | ||||| || | || Sbjct 1152986 TTGCTCTTACGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGG 1152927 Query 76436 GATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATA-GATTTGTATCGCTTCT 76493 | ||||| ||| || | ||| | | ||| | | || | || | || || Sbjct 1152926 GCTTCGAGAATCGAGTACCACA-GCTTCTGGGCACGGATCGTCTGACGACCA-CGACCCT 1152869 Query 76494 CTCTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 | | ||||| || | ||| | || ||||| || || || | ||| ||| || Sbjct 1152868 CCTTCTCATACTTCTCGTAAAGGGCC--TCAAACTCCTCGCCGTAGCAGTCAGCCAGGCC 1152811 Query 76552 AGGACATTCATTCGGACACATCAATGACCACT-CACCATCTTCCTTAACCCGTTTCATAA 76610 ||| || || || || ||||| | | ||| | | | ||||| | ||| || ||||| | Sbjct 1152810 AGGGCACTCGTTAGGGCACATGAGAGTCCAGTTCTCGTTCTTC-TCAACGCGCTTCATGA 1152752 Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTG 76670 |||||||||| ||||||||||| | || || ||||| | | ||||| ||||| Sbjct 1152751 AGAGATCAGGGATCCATAGAGCTAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGT 1152692 Query 76671 TATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCG 76730 ||||||| |||||| |||||||| | | |||||| ||||| || || ||||| || | Sbjct 1152691 GATTCTTTCGAAGATCCAGGAACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGATAG 1152632 Query 76731 CCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAA 76790 | | |||| || || || || || |||||||| | ||||||||||||||| || | | Sbjct 1152631 CAAAGGCACCAGGGCGCTTGTTGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAACA 1152572 Query 76791 CTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCAC 76850 ||| || ||| || || || || || ||||| || || ||||| | ||| || || Sbjct 1152571 CTCGCAGCATGGGGATGATTCCATTGGATGTGCCGTTGGTTCCGGCAATGTACGAGCCTG 1152512 Query 76851 ATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 76910 |||||||| || || || || ||||||||||| || ||||| | |||| Sbjct 1152511 TAGCACGAATGCGGTGAACGTTGAGACCGATACCTCCTGCCATCTTTGAGATCATGGCAC 1152452 Query 76911 AGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAAC 76970 || || | || || ||||| || || || || |||||| |||| | | ||| || | Sbjct 1152451 AGGTCTTGAGAGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGC 1152392 Query 76971 AGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGA 77030 | || | ||| || || || ||||| || | || ||||| |||||||| | Sbjct 1152391 ATGATGAGAGCTGAGCCTGGGGGGTACCGGCATTGAAGAGAGTGGGAGAAGCATGAGTAA 1152332 Query 77031 ACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTA---TATC-CCATTG 77085 | | || | || | |||| ||||| || || || || ||| | |||| || | Sbjct 1152331 AGAACTTGTTGGACATGTAG-TTGTAGGTCTCGATGACACGTTCAATGTTATCACCCCAG 1152273 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 || || ||||| |||||||| | ||| ||||| || || || ||| |||| Sbjct 1152272 ----ATACCCACAGCAACACGCATGATCATGTGCTGTGGGCGCTCAACAATCTT 1152223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930166952000