Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq142 196 6e-45 >seq142 Length=63576 Score = 196 bits (216), Expect = 6e-45 Identities = 256/353 (73%), Gaps = 6/353 (2%) Strand=Plus/Minus Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGG 145929 |||||||||||| | | ||||||||| ||||| ||||| ||||| |||| ||| Sbjct 35781 ACGTAGAACTGGGCGAACATGTGGCAGGGGGGCAGCACCATGTTGGGCATGTCCTTGGGG 35722 Query 145930 TTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCCCTATC 145986 ||||| || | |||| | ||| || ||| |||||| | || || || Sbjct 35721 TTCCACGCCGACAGGATCA---TCCGGCGGTCGTAAGGGTTCGTGCGGAGCTTGTGGATG 35665 Query 145987 AGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCG 146046 || || ||||||||| |||||||| || ||| || ||||||||||| |||||| || Sbjct 35664 AGCTCGGCGAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGTCTTGGAGTCGACGTACTCG 35605 Query 146047 GCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC 146106 ||||| ||||||| ||||||||||||||||||||| |||||||| || ||| | || Sbjct 35604 GCCCCAAAGTGCCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGATGG 35545 Query 146107 CCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 ||| ||| | | ||||||| || || ||||||||| |||||||||||||||||||| Sbjct 35544 GTCAGGCCGAGCTTGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCC 35485 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTC 146219 | || |||| | || ||| ||| |||||||||||| ||||| Sbjct 35484 TGCTCGCTGAGCGCGAGCGACGATGTGTTGCCCTGGATGAACCAGAGGAGCTC 35432 Score = 134 bits (148), Expect = 2e-26 Identities = 129/163 (79%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGA-AGTCCCCGGGCTC 145748 || ||||||| ||||||||||||||||| |||| ||||||| ||| | | ||||| | | Sbjct 36024 TCGACGTGGTCCAGGTAGACGTGCGCGTCGCCCATGACGTGGGTGAGACTGCCCGG-CAC 35966 Query 145749 GAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGG 145808 | | | || ||| |||| ||||| |||||||| | ||||||||| |||||||| || Sbjct 35965 CATGTCGCAGACGTGTGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGG 35906 Query 145809 CACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || ||||| ||||| || | || |||||||||||||||||| Sbjct 35905 GACGCCCAGGCCCATATCGCAGGACCGCTGGTACAGCTGGCAG 35863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590070995119480