Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq44 96.9 7e-15 >seq44 Length=325075 Score = 96.9 bits (106), Expect = 7e-15 Identities = 266/408 (65%), Gaps = 21/408 (5%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| | || || |||| || || ||||| || |||||||| || ||||||||| Sbjct 190335 CTGCCTCACCTACTCCTCTACGGACCCCCGGGAACGGGAAAGACGTCCACGATCCTGGCG 190394 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||||| | | | |||| | |||||||| || ||||| ||||| ||||| Sbjct 190395 CTCGCCCGCCGCATCTACGGCGCCGCCAACATGAGGCAGATGGTGCTGGAGCTCAACGCC 190454 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATG 254177 || ||||| || || | ||||| || || || |||||||||| || | || || | Sbjct 190455 TCGGACGACCGAGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTTTGCGAGCACGAAG 190514 Query 254178 TCGATTTCGTCGTT--CCAACCCGGCT--------GTCCGCC--------TTTCAAGCTC 254219 ||| | ||| | ||||||| ||| || | ||||||| Sbjct 190515 CAGATCTTCTCGCTGGGGGGCCCGGCTAAGGGGGGCTCCTCCACGGCGGGATACAAGCTC 190574 Query 254220 GTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACG 254279 | || ||||||||||||||| ||||||| | |||||| || ||||| || | Sbjct 190575 ATCATTCTGGACGAGGCGGACGCCATGACCAACACGGCGCAGATGGCGCTCCGGCGGATC 190634 Query 254280 ATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATC 254339 ||||||| | || | || ||||| || ||| | | |||||||| | ||| | Sbjct 190635 ATGGAGAAGTACACGGTCAACACGCGGTTCTGCATCATTGCCAACTACGCGCACAAGCTG 190694 Query 254340 ATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTC 254387 | | | ||||| ||||||| | ||| | |||||| ||||| Sbjct 190695 AGCCCGGCGCTGCTGAGTCGGTGCACGCGGTTCAGGTTCAGCCCCCTC 190742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073755572743616