Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq127 161 1e-34 seq9 93.3 6e-14 >seq127 Length=80722 Score = 161 bits (178), Expect = 1e-34 Identities = 404/605 (67%), Gaps = 28/605 (5%) Strand=Plus/Minus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACT-CTCCATCATCCTTTACTCGTTTCAT 79949 ||||| || |||| ||| ||||| | | ||| | ||| || || | || || ||||| Sbjct 27656 CCAGGGCACTCGTTAGGGCACATGAGAGTCCAGTTCTCGTTCTTC-TCAACGCGCTTCAT 27598 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 ||||||||||| ||||| ||||| | || || |||| | | ||| || ||||| Sbjct 27597 GAAGAGATCAGGGATCCACAGAGCCAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCC 27538 Query 80010 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 80069 ||||||| ||| || || ||| | | | |||||| ||||| || || | || || Sbjct 27537 GTGATTCTTTCGAAGGTCCAGAAACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGAT 27478 Query 80070 GGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 80129 || | | || || || ||||| || |||||||| | ||||| || ||||| || | Sbjct 27477 AGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAA 27418 Query 80130 AACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCC 80189 |||| || ||| || || || ||||||||||| || ||||| |||| || || || Sbjct 27417 CACTCGCAGCATGGGGATGATTCCATTGGATGTGCCGTTGGTACCGGCAATGTACGAGCC 27358 Query 80190 ACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 80247 | |||||||| || ||| ||||| || || |||||||| || ||||| | Sbjct 27357 TGTAGCACGAATGCGGTGAACGTTG--AGACCGATACCTCCTGCCATCTTTGAGATCATG 27300 Query 80248 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGA 80307 || || || | ||||| ||||| || || ||||| ||||| |||| | | || Sbjct 27299 GCACAGGTCTTGAGAGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACAAGG 27240 Query 80308 AAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGC 80363 || || || | | ||| | || || || ||||| |||| || |||||||| Sbjct 27239 AAGCATGATGAGA---GCTGA-GCCTGGGGGGTACCGGCATTGAATAGAGTGGGAGAAGC 27184 Query 80364 GTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTAT----- 80417 || ||||| | || | |||| |||| ||||| ||||| || | ||| || Sbjct 27183 ATGAGTAAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCGATGACACGTTCAATGTTAT 27125 Query 80418 -ATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 80476 | |||| ||| || || | |||||||| | |||||| || || | ||||| | Sbjct 27124 CACCCCA------AATACCCACAGAAACACGCATGATCATGTGTTGTGGGCGCTCAACAA 27071 Query 80477 TCTTG 80481 ||||| Sbjct 27070 TCTTG 27066 >seq9 Length=1081052 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| || ||| ||||||||||| | || || |||||||| || ||||| Sbjct 1020280 CAAGCGAAGTCAGTGTGAAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTGAGA 1020339 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || |||||||| || | ||| || || || || || | ||| |||||| Sbjct 1020340 CCAGGCATCAGACCACGCTTCTTCAACCAGAAAATAGAAGCGAAAGCACCACTGAAGAAG 1020399 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || || || || ||||| ||||||||||| Sbjct 1020400 ATGCCCTCGACGGCGGCGAAGGCAACAAG 1020428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718261734030680