Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq127 150 2e-31 >seq127 Length=80722 Score = 150 bits (166), Expect = 2e-31 Identities = 353/523 (67%), Gaps = 16/523 (3%) Strand=Plus/Minus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACT-CTCCATCATCATTTACTCGTTTCAT 72032 ||||| || || || || ||||| | | ||| | ||| || || | || || ||||| Sbjct 27656 CCAGGGCACTCGTTAGGGCACATGAGAGTCCAGTTCTCGTTCTTC-TCAACGCGCTTCAT 27598 Query 72033 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 72092 ||||||||||| ||||| ||||| | || || |||| | | ||| || ||||| Sbjct 27597 GAAGAGATCAGGGATCCACAGAGCCAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCC 27538 Query 72093 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 72152 ||||||| ||| || || ||| | | | |||||| ||||| || || | || || Sbjct 27537 GTGATTCTTTCGAAGGTCCAGAAACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGAT 27478 Query 72153 GGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATA 72212 || | | || || || ||||| || |||||||| | ||||| || ||||| || | Sbjct 27477 AGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAA 27418 Query 72213 AACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCC 72272 |||| || ||| || || || |||||||||| || ||||| |||| || || || Sbjct 27417 CACTCGCAGCATGGGGATGATTCCATTGGATGTGCCGTTGGTACCGGCAATGTACGAGCC 27358 Query 72273 ACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 72330 | |||||||| | || ||| ||||| || || |||||||| || ||||| | Sbjct 27357 TGTAGCACGAATGCGGTGAACGTTG--AGACCGATACCTCCTGCCATCTTTGAGATCATG 27300 Query 72331 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGA 72390 || || || | ||||| ||||| || || || || |||||| |||| | | || Sbjct 27299 GCACAGGTCTTGAGAGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACAAGG 27240 Query 72391 AAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGC 72446 || || || | | ||| | || || || ||||| |||| || |||||||| Sbjct 27239 AAGCATGATGAGA---GCTGA-GCCTGGGGGGTACCGGCATTGAATAGAGTGGGAGAAGC 27184 Query 72447 GTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAAT 72488 || ||||| | || | |||| |||| ||||| ||||| || Sbjct 27183 ATGAGTAAAGAACTTGTTGGACATGTAG-TTGTAGGTCTCGAT 27142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671132597668120