Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 86.0 6e-12 >seq9 Length=1081052 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || || || ||||| |||| || ||||| | Sbjct 1019991 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTTTTGCCTCCAAGGGAGATGTTCTC 1020050 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | ||| | |||||||| ||| | ||| || || Sbjct 1020051 CATGAAGTCGAAGGGGTTGGTCGACTTGTACACCTTGTCGTTGCCGAGAGCGACCAGAAG 1020110 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACAT--GGATTGCGAATTCATGCCCAACATA 119819 || || || |||||||||||||| | ||| || | ||| |||||||||| ||| Sbjct 1020111 ACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTGGCG--TTCATGCCCAGCATG 1020168 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 ||| || | || | || ||||| ||||| |||||| ||| || || Sbjct 1020169 GCGCAAGGAAGGGCCTCAGTCAAGAACTCCTTCTCAATGGTGACGGCGTC 1020218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478657691158640