Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq9 105 4e-18 >seq9 Length=1081052 Score = 105 bits (116), Expect = 4e-18 Identities = 199/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||||| ||||| |||||||| ||| ||| || | ||| | || || || |||||| Sbjct 965033 GACGCCTTCTATCGCTACAAGATGGAGCGTCTCCAGACAAAGATTGAAGGCAAAGGAAAC 965092 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 ||||| |||||||| |||||||| |||| || || || | |||| ||||||| | Sbjct 965093 GGTATCAAAACCGTTGTTGTCAACTTGCCCAGCGTTGCCCAGTCTCTCGCTCGCCCTGGC 965152 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 || | | || || ||||| | || || || || ||||| | | || | ||| Sbjct 965153 GCCCATGTCATCAAGTACTTCGGTTTTGAGCTGGGTGCCCAGACTAATATGGACCCCAAG 965212 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 | || || | ||| | ||||| | ||| || | || ||||| || ||| || || Sbjct 965213 GATGACCGATGGATCATCAACGGTGCTCATGACGCAGCTAAGCTTCAAGACCATCTCGAT 965272 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 |||||||| ||||||||| || || |||| | ||||| |||||||| Sbjct 965273 GGCTTTATCAACAAGTTTGTCCTCTGCAAAAAATGTAAGAACCCAGAGACCGA 965325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943987332997