Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq127 192 7e-44 seq9 116 4e-21 >seq127 Length=80722 Score = 192 bits (212), Expect = 7e-44 Identities = 892/1393 (64%), Gaps = 31/1393 (2%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| ||||| ||||| |||||||| |||||||| || | ||| | Sbjct 28460 TAGATGTTGGATGTGTAGGGCTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACTG 28401 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 ||||||||||| || |||| ||| || ||||| |||| ||| | || | || | || Sbjct 28400 GCTGTGGGCATAGGAGCCACGAGCAGACTGTTGCGGATACCGTGCTCTTTGATCTGCTCT 28341 Query 114062 TTGAGGGCGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGA 114119 || | ||||| | | || | || | | | |||||| || ||||| | Sbjct 28340 CGAAGCGTCTCCCACTCCCAAAGGTCAG--AGGGGGTGACATTCCACATGTCGAACTGAA 28283 Query 114120 GGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCA 114179 |||| || | || ||||| ||||||| || |||| ||| || || | ||| ||| | Sbjct 28282 GGATTCCCTCTGAAGCTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGA 28223 Query 114180 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-TT 114238 ||| | | | ||||| || || || |||||||| || || | ||||| | Sbjct 28222 GTTCCATGGACTCAGTAAGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCT 28163 Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACA-AAATAAATACATCCGCGAGACC 114297 | | ||||| || || || | | | ||| | | ||| |||| || ||||| Sbjct 28162 GAC-GAGCCTCAGGCGACTCGAAAG-GCATGCGCAGAGCCAAGAATGCATCTGCAAGACC 28105 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGG 114357 || ||||| || ||||| || ||||| | ||| || || || || || ||||| Sbjct 28104 CTGAACACCAAGACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGG 28045 Query 114358 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 114417 || | || |||||| | | || || || || |||| ||| | ||| || Sbjct 28044 GTAGTAGTTGACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTG 27985 Query 114418 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477 ||||| | | | | | | || || | || || || || || || | || Sbjct 27984 GAGCTTCTTGAAGTTGTAGCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGA 27925 Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537 ||||| || || |||| |||||| | | ||| || ||||| || || || | Sbjct 27924 AGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCAGTATTCAATAATCTCAGTGCAAAG 27865 Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597 ||| || || || || |||| |||||| || || ||| ||| || |||||||| Sbjct 27864 ATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTT 27805 Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 114656 |||||||||| | || | || ||||| ||||||| | ||| || | | ||| | | | Sbjct 27804 GTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAGCTT 27745 Query 114657 CGGCGGCTGGCACAG--TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGC 114714 | | ||| | | | || || | || ||||||| || ||||| ||| ||||| Sbjct 27744 CTG-GGCACGGATCGTCTGACG--ACCACGACCCTCCTTTTCATACTTCTCGTATAGGGC 27688 Query 114715 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 114774 |||||||| || || | || | || || || || | ||||| | ||||| Sbjct 27687 CTCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAGT 27628 Query 114775 CCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAA 114834 ||| | | || |||||| |||||||||||||| || |||||||| ||||| ||| Sbjct 27627 CCAGTTCTCGTTCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAA 27568 Query 114835 GAGATCCCG-ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 114893 || || || || || | ||||| | || ||||| || | |||| ||| || | Sbjct 27567 CAGGTCTCGTGCACGGATC-TCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCGA 27509 Query 114894 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTACGACGAC 114947 || ||| | |||||| || || || || | || | | || | ||| | | | Sbjct 27508 AGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTT--GTTG-C 27452 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || |||| | ||||| || || ||| || || || || ||||| || ||||| |||| Sbjct 27451 CACCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCAT 27392 Query 115008 CAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTG 115065 ||| ||| || || || || |||||| || | || | | || | || Sbjct 27391 TGGATGTGCCGTTGGTACCGGCAATGTACGAGCCT--GTAGCACGAATGCGGTGAACGTT 27334 Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125 | ||| ||||| |||||| ||||||||| || || | ||||| | ||||||| Sbjct 27333 GAGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 27274 Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185 ||||| || |||| |||| | ||| ||||||||| || | || | | || Sbjct 27273 ACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGG 27214 Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTAT 115244 ||||| || ||||| || || || | || || | || | || | | |||||| | | Sbjct 27213 GGTACCGGCATTGAATAGAGTGGGAGAAGCATGAGTAAAGA-ACTTGTTGGACATGTAGT 27155 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 ||||||||| | ||| ||||| || || |||||| | || || ||||| | Sbjct 27154 TGTAGGTCTCGATGACACGTTCAATGTTATCACCCCAAATACCCACAGAAACACGCATGA 27095 Query 115305 ACATGTATTGGGG 115317 ||||| ||| || Sbjct 27094 TCATGTGTTGTGG 27082 >seq9 Length=1081052 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| |||||||||||||||||||| || || || |||||| || || ||||| ||||| Sbjct 1020294 GTGAAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTGAGACCAGGCATCAGACC 1020353 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||||||||||||| | | || | ||| ||||||||| ||||| || Sbjct 1020354 ACGCTTCTTCAACCAGAAAATAGAAGCGAAAGCACCACTGAAGAAGATGCCCTCGACGGC 1020413 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||||| |||| ||||||| ||| || Sbjct 1020414 GGCGAAGGCAACAAGACGCTGAGCGAA 1020440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347723533960