Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-12 >seq5 Length=1482039 Score = 89.7 bits (98), Expect = 4e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 668850 TAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTG 668909 ||| ||| || || || ||| | ||||| || |||||||| || |||||||| | || | Sbjct 1057751 TAAAAGGAAAGGAGGGCCGTCTGAGAGGTAACTTGATGGGTAAGCGTGTCGACTTTTCAG 1057810 Query 668910 CACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTA 668969 ||||||| || || ||| |||| |||| | | || | |||||||||||||||| | Sbjct 1057811 CACGTACTGTCATCACTGGTGATGCCAACCTGTCACTGCACGAAGTTGGTGTTCCTCGCA 1057870 Query 668970 TTATTGCTAAAAATCTTAC 668988 |||||| || |||||| Sbjct 1057871 GCATTGCTCGAACTCTTAC 1057889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780783346467622