Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq127 235 6e-57 >seq127 Length=80722 Score = 235 bits (260), Expect = 6e-57 Identities = 895/1380 (65%), Gaps = 41/1380 (3%) Strand=Plus/Minus Query 109713 GTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGG 109772 |||||| || || || ||||| || |||||| ||||||||| | |||||||| Sbjct 28500 GTTGACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTGGATGTGTAGGG 28441 Query 109773 TTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCAT 109832 ||||| || ||||||||||| | ||| || | || ||||||||||| ||||||| Sbjct 28440 CTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACTGGCTGTGGGCATAGGAGCCAC 28381 Query 109833 GAGAAGACTGTTTCGGAGACCCTTCGTCTTT-ACCCGCTCACGCATTGCGTCCCAATCAT 109891 ||| |||||||| |||| ||| | | ||||| | | |||| || | | ||||| || Sbjct 28380 GAGCAGACTGTTGCGGATACCGTGC-TCTTTGATCTGCTCTCGAAGCGTCTCCCACTCCC 28322 Query 109892 AACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAG 109951 || | | | | || ||| |||||| || ||||| | ||||| | || Sbjct 28321 AAAGGTC---AGAGGGGGT---GACATTCCACATGTCGAACTGAAGGATTCCCTCTGAAG 28268 Query 109952 CAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCT 110011 | || || |||||||| ||| ||| | || | ||| || | || ||| | | Sbjct 28267 CTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTC-CATGGACTCA 28209 Query 110012 CT-AGTGCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCA 110070 | || || ||||| || || ||||| || || || ||||| | |||| ||| Sbjct 28208 GTAAGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCTGACGAGCCTCAGGC 28149 Query 110071 CAGTCG-AAGGGAAGACCA---CAAAGAATAAACACATCCGCTAGACCCTGAACACCGAG 110126 | ||| |||| | | || | |||||| |||| || |||||||||||||| || Sbjct 28148 GACTCGAAAGGCATGCGCAGAGCCAAGAAT----GCATCTGCAAGACCCTGAACACCAAG 28093 Query 110127 ACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCG 110186 ||||||||| ||||| |||||| | || || | |||||||| ||||| Sbjct 28092 ACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTAGTTGAC 28033 Query 110187 GTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTA 110246 ||||||| || || || || | | | | || | ||| ||||| || | | | Sbjct 28032 ATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTGGAGCTTCTTGAA 27973 Query 110247 ATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGC 110305 | | | | | || || | || || || ||| ||||| | || || || |||| Sbjct 27972 GTTGTA-GCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGAAGCCAGGTTGC 27914 Query 110306 ACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCT 110365 | |||| | ||| || || |||||| | ||| || || || | ||||| || Sbjct 27913 AAACAGCAACCTCATCGGGAGCGCAGTATTCAATAATCTCAGTGCAAAGATTGGAGCTGC 27854 Query 110366 TAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGT 110425 || ||||| ||||||||| || || |||||| |||||||| || |||||| Sbjct 27853 GGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAAAGCATGA 27794 Query 110426 ATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGG 110484 | ||| ||||||| || || || | | ||| || | | ||| | | || | ||| || Sbjct 27793 AGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAGCTTCTG-GGCACGG 27735 Query 110485 ACAGT-TG-CGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542 | || || || | | |||| |||| || ||||| ||| | | ||||||| |||| Sbjct 27734 ATCGTCTGACG--ACCACGACCCTCCTTTTCATACTTCTCGTATAGGGCCTCAAACTCCT 27677 Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCAC 110602 ||||| |||| || || || || || || | ||| | ||| || | Sbjct 27676 CGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAGTCCAGTTCTCGT 27617 Query 110603 CCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGC 110662 || |||||| | ||||||||| || ||||| ||||||| ||| ||| ||||| || Sbjct 27616 TCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAGGTCTCGTG 27557 Query 110663 AACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGT 110722 ||| |||||| | || || || || || |||| ||| || | || ||| |||| Sbjct 27556 CACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCGAAGACATCAGAGT 27497 Query 110723 GCCATGGTTCGAGATAGACAGCGATGGATCC------CTTACGACGACCCGCCTGGTTAA 110776 |||| || |||||||||| ||| | || || ||| | | || |||| | || Sbjct 27496 GCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTT--GTTG-CCACCCTGATCAA 27440 Query 110777 CATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCAT 110836 |||| | || ||| ||||| || | ||||| || || ||||||| |||| || | Sbjct 27439 CATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTGGATGTGCCGT 27380 Query 110837 TTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCAC 110896 | ||||| ||| || | ||||||||| ||| | | | ||| ||||| | Sbjct 27379 TGGTACCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGTTGAGACCGATACCTC 27320 Query 110897 CCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAA 110955 | ||| ||| || ||||| ||| |||| ||| | || ||||| ||||| Sbjct 27319 CTGCCATCTTTGAGATCATGGCACAGGTCT-TGAGAGTATCGTAGATACCGTCAATGCTG 27261 Query 110956 TCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTG 111015 || |||| | | | || ||||| || || | ||||| | || || || |||||| Sbjct 27260 TCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGGTACCGGCATTG 27201 Query 111016 AAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGA 111073 || || || || | |||||| | | ||| |||| |||||| | |||||| || |||| Sbjct 27200 AATAGAGTGGGAGAAGCATGA--GTAAAGAACTTGTTGGACATGTAGTTGTAGGTCTCGA 27143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970205948600