Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq127 248 2e-60 seq9 154 3e-32 >seq127 Length=80722 Score = 248 bits (274), Expect = 2e-60 Identities = 905/1393 (65%), Gaps = 49/1393 (4%) Strand=Plus/Minus Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966 |||||||| | |||||| || || | || || | | ||| | ||| || |||||| Sbjct 28502 GGGTTGACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTGGATGTGTAG 28443 Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026 ||||||| || || ||||| |||| ||||| | || |||||||||||||| |||||| Sbjct 28442 GGCTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACTGGCTGTGGGCATAGGAGCC 28383 Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGC-TCTGCCCAGTC 213085 || || |||||||| | | |||||||| ||| | |||||| ||| |||| || Sbjct 28382 ACGAGCAGACTGTTGCGGATACCGTGCTCTTTGATCTGCTCTCGAAGCGTCT-CCCACTC 28324 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA-TGCCTT 213144 ||| | |||| || | || ||||||||||| ||||| | || | ||| Sbjct 28323 CCAAAGGTCAGAGGGG---------GTGACATTCCACATGTCGAACTGAAGGATTCCCTC 28273 Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204 || |||| | |||| | | | |||||| || |||||||| || || || || Sbjct 28272 TGAAGCTGGGGAT-CCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTCCATGG 28214 Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264 || | ||||| || | |||||| || || || |||| | | || |||| |||| Sbjct 28213 ACTCAGTAAGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCTGACGAGCCT 28154 Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 | || ||| ||| ||||| || ||| |||| || || ||||| || || | Sbjct 28153 CAGGCGACTCGAAAGGCATGCGCAGAGCCAAGAATGCATCTGCAAGACCCTGAACACCAA 28094 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || ||||||| || | || ||| ||| | || ||||| | |||||| ||||| Sbjct 28093 GACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGC-CTCCTGAACGGGGTAGTAGTTG 28035 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||| ||| ||||| || | || || || | | || | || | Sbjct 28034 ACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTGGAGCTTCTTG 27975 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAA---ACTCAGGCAGGGCGATGCTGGCCAGG 213500 ||| | | ||||| |||| | ||| | | ||||| || | |||||| Sbjct 27974 AAGTTGTA---GCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGAAGCCAGG 27918 Query 213501 TTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCT 213559 |||||||| || ||||| | | ||| | ||| || || ||||| ||||| || ||| Sbjct 27917 TTGCAAACAGCAACCTCATCGGGAG-CGCAGTATTCAATAATCTCAGTGCAAAGATTGGA 27859 Query 213560 GCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAG 213619 || ||||| || |||||||||| ||||| ||| |||| || ||||||||| || Sbjct 27858 GCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAAAG 27799 Query 213620 CATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGC 213679 |||| ||||| || ||||| |||| | || ||| | ||| || | | ||| Sbjct 27798 CATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAGCTTCTGGGC 27739 Query 213680 CTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGTAGAGCTCGTT 213736 || || ||||| | || | | || || |||| ||||| || | | Sbjct 27738 ----ACGGATCGTCTGACGACCACGACCCT--CCTTTTCATACTTCTCGTATAGGGCCTC 27685 Query 213737 GAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACATGAGG 213791 || || | ||| || | || ||| || || |||| | || || |||||||| Sbjct 27684 AAACTCCTCGCCGTAG---CAGT-CAG-CCAGGCCAGGGCACTCGTTAGGGCACATGAGA 27630 Query 213792 CTCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGT 213850 |||||| | || || |||| || | || |||||| || || |||| |||||| || Sbjct 27629 GTCCAGTTCTCGTTCTTCTC-AACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAG 27571 Query 213851 GAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTC 213910 ||||||||| | | | |||| ||| ||| || || || || || ||||| || Sbjct 27570 GAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTC 27511 Query 213911 AAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCC 213967 |||| || | |||||| ||||| | ||||| |||||||| || | || | ||||| Sbjct 27510 GAAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTTGTTGCC 27451 Query 213968 GCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTT 214027 ||||| || || ||||| ||||||| | ||||| | ||| | | || || Sbjct 27450 ACCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATT 27391 Query 214028 GGACTGT-CCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGA 214086 ||| ||| |||||||| || || || |||||||| | || | | | | | | || Sbjct 27390 GGA-TGTGCCGTTGGTACCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGTTGA 27332 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 | || || || || || ||| ||||||||||| ||| | | | ||| || ||| | Sbjct 27331 GACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATAC 27272 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACG 214206 || | ||||||||||| | | | | | |||||| |||||||| | | || | Sbjct 27271 CGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGG 27212 Query 214207 AGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGT 214266 || | ||||| || ||||| ||||| | | |||||||| || | | ||| Sbjct 27211 TACCGGCATTGAATAGAGTGGGAGAAGCATGAGTAAAGAACTTGTTGGACATGTAGTTGT 27152 Query 214267 AGGTCTCCAGGAC 214279 ||||||| | ||| Sbjct 27151 AGGTCTCGATGAC 27139 >seq9 Length=1081052 Score = 154 bits (170), Expect = 3e-32 Identities = 342/506 (68%), Gaps = 13/506 (3%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACG-AGATGTTCT 47897 ||||||||| || || | ||||| |||||||| || || || ||||| | ||||||||| Sbjct 1019991 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTTTTGCC-TCCAAGGGAGATGTTCT 1020049 Query 47898 CCATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGC 47956 |||||||| ||||||||||| | || |||||| |||| ||| | |||| Sbjct 1020050 CCATGAAGTCGAAGGGGTTGGTCGACTTGTACACCT-TGTCGTTGCCGAGAGCGACCAGA 1020108 Query 47957 AGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGG 48016 || | || || || |||||||||| | ||| ||| || ||||||||| | | | Sbjct 1020109 AGACGGTCGGCAACAAACTCGATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGCATG 1020168 Query 48017 GACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 | || | |||| || | ||||||||||| || ||||| || | || Sbjct 1020169 GCGCAAGGAAGGGCCTCAGTCAAGAACTCCTTCTCAATGGTGACGGCGTCAGTGATGATG 1020228 Query 48077 TGCTTAACGCGGGACTC---TGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || | || || | | ||||| ||| || || | ||| | ||| Sbjct 1020229 CTCTCAATGACCTCCTTGCTTGCGCGGTTGTT---CAGATG---GGAGTGGAGTAGGCAA 1020282 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||| | || ||||| ||| ||| ||| ||||||||||| ||||||| Sbjct 1020283 GCGAAGTCAGTGTGAAGACCCTCGTCACGGGAGATCAGCTCGTTGGAGAAGGTGAGACCA 1020342 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || || | ||||||||| | ||||||| ||| |||||||||| Sbjct 1020343 GGCATCAGACCACGCTTCTTCAACCAGAAAATAGAAGCGAAAGCACCACTGAAGAAGATG 1020402 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || ||||| || || | || |||| | | |||||||| |||| Sbjct 1020403 CCCTCGACGGCGGCGAAGGCAACAAGACGCTGAGCGAATGTGGATTTCTTGTCCTGGATC 1020462 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||| || ||||| || |||||||| Sbjct 1020463 CAGCGAATTGCCCACTCGGCCTTCTT 1020488 Score = 96.9 bits (106), Expect = 6e-15 Identities = 174/251 (69%), Gaps = 5/251 (2%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || |||||||| ||||||||| | |||||| | Sbjct 1020630 TCTCTGAGTGGATGTTCTCCATCATAATCTGGAATCCGTAGAAGCAACGAGCCTCAGGAA 1020689 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | | ||| | ||| | ||| ||||||||||| || ||||| || |||| Sbjct 1020690 TCTGGACCTCAGCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATGCCATCAGAGGCAG 1020749 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCC 48605 | ||||||||||| || || | ||| | |||||||| | | | | | | | || Sbjct 1020750 CGAAGAAGGCAAGAACGTGAGAGACGAAGTAGCGCTCGTCATCGTTCATACGGGTGTGCC 1020809 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC-GAGTGCT 48664 || | || | || ||| ||| || | ||| || |||||||||| || || |||| Sbjct 1020810 AGTCGTGGAGATCCTTGGACAGATCGATTTCCTCAGCAGTCCAGAAAGAAGCTTCGTGC- 1020868 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 1020869 TTCTTGTACAT 1020879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931523636046080