Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq127 223 4e-53 seq9 89.7 6e-13 >seq127 Length=80722 Score = 223 bits (246), Expect = 4e-53 Identities = 1157/1816 (64%), Gaps = 55/1816 (3%) Strand=Plus/Plus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT--TCAACGGCTCGATGGCATCCTCA 75203 ||||| ||| |||| || || ||| |||||| |||| |||| | |||| | Sbjct 27016 TACTTCGGTTTCAAGACACTGGAGCGTTCCTATCTCCTCAA--GCTCAACGGCAAGATTG 27073 Query 75204 TGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTG 75263 | || |||||| ||||| ||||||| || | | || || || || |||||| Sbjct 27074 TTGAGCGCCCACAACACATGATCATGCGTGTTTCTGTGGGTATTTGGGGTGATAACATTG 27133 Query 75264 ATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCA 75322 | |||| | ||||| ||| || | |||||| | | || | || | ||| || | || Sbjct 27134 AACGTGTCATCGAGACCTACAACTACATGTCCAACAAGT-TCTTTACTCATGCTTCTCCC 27192 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || || |||||||| ||||| || | ||| | || ||||||||| ||| | Sbjct 27193 ACTCTATTCAATGCCGGTACCCCCCAGGCTCAGCTCTCATCATGCTTCCTTGTCGATATG 27252 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||| ||| || |||||||||| | ||||| | | ||||| ||||||||| Sbjct 27253 AAGGATGACAGCATTGACGGTATCTACGATACTCTCAAGACCTGTGCCATGATCTCAAAG 27312 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTC 75500 ||| || ||||| || | || | || | | || | | |||||| || Sbjct 27313 ATGGCAGGAGGTATCGGTCTCAACGTTCACCGCATTCGTGCTAC--AGGCTCGTACATTG 27370 Query 75501 GGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAG 75560 || || || || ||| |||| || || || ||||| || || || ||| ||| | Sbjct 27371 CCGGTACCAACGGCACATCCAATGGAATCATCCCCATGCTGCGAGTGTTCAACAACACTG 27430 Query 75561 CGCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAA 75616 | | ||||| |||| | | ||| | || || || | || |||| | || Sbjct 27431 CCAGATATGTTGATCAGG-GTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTATCTCGAG 27489 Query 75617 CCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAG 75676 || ||||| | ||| || | ||||| || || | ||| || || || | |||||| Sbjct 27490 CCCTGGCACTCTGATGTCTTCGAGTTTCTGGACCTTCGAAAGAATCACGGAAAGGAAGAG 27549 Query 75677 GCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGT 75735 || ||| | |||| || || | |||||||| || || || ||||||||||| || Sbjct 27550 A-TCCGTGCACGAGACCTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGCGCGT 27608 Query 75736 TGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGC 75795 |||| || | | ||| |||| | || || || || || || || | ||| Sbjct 27609 TGAGAAGAACGAGAACTGGACTCTCATGTGCCCTAACGAGTGCCCTGGCCTGGCTGACTG 27668 Query 75796 GGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC 75855 || ||||||||||| ||||| ||| ||||||||| |||||||| | | | Sbjct 27669 CTACGGCGAGGAGTTTGAGGCCCTATACGAGAAGTATGAAAAGGAGGGTCGTGGTCGTCA 27728 Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 ||| | | ||| | || | | ||| | | || ||| || | || || |||||||| | Sbjct 27729 GACGATCCGTGCC-CAGAAGCTGTGGTACTCGATCCTCGAAGCCCAAACCGAGACTGGTA 27787 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 || | |||||||||||||||||||| ||| ||||| ||||| ||||| |||| | Sbjct 27788 ACCCCTTCATGCTTTACAAGGATGCTTGCAACCGTAAGAGCAACCAGAAGAACCTGGGTA 27847 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | ||| ||||| ||||||||||| || ||| | || ||| | | |||||| | Sbjct 27848 CTATCCGCAGCTCCAATCTTTGCACTGAGATTATTGAATACTGCGCTCCCGATGAGGTTG 27907 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTT 76094 |||||||||| |||| || | || || || || || || | || || | Sbjct 27908 CTGTTTGCAACCTGGCTTCGCTGGCTCTGCCCGCCTACGTTGATTACGACGAGGGCTGCT 27967 Query 76095 TTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCA 76154 | | | || || || ||| | ||| | || | || || ||||| ||| Sbjct 27968 ACAACTTCAAGAAGCTCCACGAAGTTACACGGGTTATCGTGCGTAACCTGAACCGTATCA 28027 Query 76155 TTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTA 76214 | || || | || |||||| || || || || || ||||| || |||| | Sbjct 28028 TCGATGTCAACTACTACCCCGTTCAGGAGGCACGCAACAGCAACATGCGTCATCGACCCA 28087 Query 76215 TTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGC-TACGCATTT-GA 76272 ||||| | |||||||| ||||| || |||| ||| || | | || | || ||| || Sbjct 28088 TTGGTCTTGGTGTTCAGGGTCTTGCAGATGCATT--CTTGGCTCTGCGCATGCCTTTCGA 28145 Query 76273 TTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCT 76332 || ||| || || ||||| | ||||| || || || || || || |||| Sbjct 28146 GTCGCCTGAGGCTCGTCAGCTGAATAAGCAGATCTTCGAGACAATCTACCATGCCGCCCT 28205 Query 76333 ---GGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 ||| | | || ||| | || | | |||||| |||| |||| || |||| || Sbjct 28206 TACTGAGTCCA--TG-GAACTCGCGAAGGAGCAAGGTCCCTACCAGACCTTCAAGGGATC 28262 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC-- 76447 || || || | || | |||||||| || |||| |||| || | || || | | Sbjct 28263 CCCAGCTTCAGAGGGAATCCTTCAGTTCGACATGT-GGAATGT-CACCCCCTCTGACCTT 28320 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | || ||||| || || | ||||| ||| | ||| | || |||||||| | Sbjct 28321 TGGGAGTGGGAGACGCTTCGAGAGCAGATCAAAGAGCACGGTATCCGCAACAGTCTGCTC 28380 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 |||| || ||||| |||||| ||| | || |||||||| || ||||||||||| || Sbjct 28381 GTGGCTCCTATGCCCACAGCCAGTACCTCTCAGATCTTGGGCAACAATGAATGCTTCGAG 28440 Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 || |||||| | ||||||||| || | || || || ||||| | |||||| Sbjct 28441 CCCTACACATCCAACATCTACTCCCGACGTGTTCTGGCTGGAGAGTTCCAGGTCGTCAAC 28500 Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG----GA 76683 ||| | || || || || | || | |||||| | | |||||| || Sbjct 28501 CCCTGGCTCTTAAAAGATCTTGTTGAGTTGGGCTTGTGGTCCGATGCCATGAAGAACCGA 28560 Query 76684 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAA 76743 | || |||| ||||| || ||||| ||| | | ||||| ||||| |||| Sbjct 28561 ATTATTGCTGAA----CAAGGTTCGATCCAAAACATCCCCAACATCCCTGATGACCTCAA 28616 Query 76744 GAATCTCTACCGCACAGTGTGGGAAA----TCAAGATGAAAGATGTCATTGACATGGCCG 76799 | |||||| || || ||||| | |||| | || || | | ||||||| Sbjct 28617 GGCCCTCTACAAGACCGTCTGGGAGATTTCTCAACGTCAA----GTTGTGCAGATGGCCG 28672 Query 76800 CAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGA--ATCTATTCATGGAAAGTCC 76857 | ||||| ||| |||||||| ||| |||| | | | ||| || ||| | ||| Sbjct 28673 CCGATCGAGGTGCTTTCATTGACCAATCTCAATCTCTCAACATCCAT--ATGAAGGATCC 28730 Query 76858 AACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCG 76916 | ||| |||| | | |||||| | || || |||||| ||| ||||| || | Sbjct 28731 CTCAATGGGCAAGATTACCAGTATGCACTTTGCTGGC-TGGAAATTGGGACTCAAGACTG 28789 Query 76917 GAATGTACTATCTCCG 76932 | ||||||||||| || Sbjct 28790 GCATGTACTATCTTCG 28805 >seq9 Length=1081052 Score = 89.7 bits (98), Expect = 6e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 ||||| |||| ||| |||| || || || ||||| ||||||||| || | ||| Sbjct 1020440 TTCGCTCAGCGTCTTGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGTGGTGCTTTC 1020381 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 |||||| |||||||||||||| ||||| ||||| || || |||||| || || Sbjct 1020380 GCTTCTATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAG 1020321 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || ||||| || |||||||| ||| Sbjct 1020320 CTGATCTCCCGTGACGAGGGTCTTCAC 1020294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563731246560