Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq142 149 7e-31 >seq142 Length=63576 Score = 149 bits (164), Expect = 7e-31 Identities = 243/350 (69%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | |||||||| || |||||| ||||| ||||| |||| |||| Sbjct 35781 ACGTAGAACTGGGCGAACATGTGGCAGGGGGGCAGCACCATGTTGGGCATGTCCTTGGGG 35722 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| ||||| | | || ||| | | | |||||| | | || | ||| | | Sbjct 35721 TTCCACGCCGACAGGATCATCCGGCGGTCGTAAGGGTTCGTGCGGAGCTTGTGGATGAGC 35662 Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCC 147285 |||||||| ||||||||||| ||||| ||| | |||| |||||| |||| Sbjct 35661 TCGGCGAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGTCTTGGAGTCGACGTACTCGGCC 35602 Query 147286 CCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAG 147345 |||||||||| ||||||||| ||||| || || ||||||||||| || | || | Sbjct 35601 CCAAAGTGCCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGATGGGTC 35542 Query 147346 AAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTG 147405 | ||| | | ||| |||||| | ||||||| | |||||||||| || |||| Sbjct 35541 AGGCCGAGCTTGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGACGCCCTGC 35482 Query 147406 GCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 || |||| | || ||| |||| ||||||||||||| ||||| Sbjct 35481 TCGCTGAGCGCGAGCGACGATGTGTTGCCCTGGATGAACCAGAGGAGCTC 35432 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| |||| ||||| || ||||| | | ||||||| | || | || ||| Sbjct 36078 ATCTCCAGCTCAGGGAACGGCCGGGGTTCTCGCTCCAGCTGCTCCCTGAGCGCGTCGACG 36019 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| ||||||||||||||||| |||| | ||| | |||||| | | || Sbjct 36018 TGGTCCAGGTAGACGTGCGCGTCGCCCATGACGTGGGTGAGACTGCCCGGCACCATGTCG 35959 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 ||||| || | ||||| || ||||||| ||||||||| |||||||| ||||| ||| Sbjct 35958 CAGACGTGTGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCC 35899 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 |||||||| || | |||| ||||||||||||||| Sbjct 35898 AGGCCCATATCGCAGGACCGCTGGTACAGCTGGCA 35864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482259936800