Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq9 87.8 6e-12 >seq9 Length=1081052 Score = 87.8 bits (96), Expect = 6e-12 Identities = 121/168 (72%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || || || || | ||||| || | || || || || ||||| || || Sbjct 1020433 AGCGTCTTGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGTGGT-GCTTTCGCTTCT 1020375 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 || ||||||||||| |||||||| || |||| ||||| ||||| ||||| |||||| Sbjct 1020374 ATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGATC 1020315 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 || ||||||||| | || |||||||| || || ||| || || Sbjct 1020314 TCCCGTGACGAGGGTCTTCACACTGACTTCGCTTGCCTACTCCACTCC 1020267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588319984113215