Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq127 383 2e-101 seq9 118 1e-21 >seq127 Length=80722 Score = 383 bits (424), Expect = 2e-101 Identities = 1094/1657 (66%), Gaps = 40/1657 (2%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || || | |||||||||||| |||||||| ||| ||||| || | ||||||||| Sbjct 28808 GTACGAAGATAGTACATGCCAGTCTTGAGTCCCAATTTCCAGCCAGCAAAGTGCATACTG 28749 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | |||| ||| || | || ||| ||||||||| || || || ||||| ||| Sbjct 28748 GTAATCTTGCCCATTGAGGGATCCTTCATATGGATGTTGAGAGATTGAGATTGGTCAATG 28689 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACC-GACTTTTGCGGAATCTCCCAGATGGT 78368 | ||||| || ||||| ||||| | | || ||| || | | ||||||||||| ||| Sbjct 28688 AAAGCACCTCGATCGGCGGCCATCTGCACAACTTGACGTT-GAGAAATCTCCCAGACGGT 28630 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCG-GCTC 78427 | ||| | |||||| || || || |||||| | | | | || ||| | || Sbjct 28629 CTTGTAGAGGGCCTTGAGGTCATCAGGGATGTTGGGGATGTTTTGGATCGAACCTTGTTC 28570 Query 78428 -GCACAATTTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGA- 78484 ||| | ||| ||||| || | | ||| | || |||||| | Sbjct 28569 AGCAATAATTCGGTTCTTCATGGCATCGGACCACAAGCCCAACTCAACAAGATCTTTTAA 28510 Query 78485 ---CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGT 78541 ||||| |||| | | |||||| || ||||| || || |||||||| Sbjct 28509 GAGCCAGG----GGTTGACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGT 28454 Query 78542 TGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCG 78601 ||| ||||| |||||||| || ||||| |||| |||||| | ||| ||| || | Sbjct 28453 TGGATGTGTAGGGCTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACTGGCTGTGG 28394 Query 78602 GCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCT-----CGACCTT 78656 |||| || || || || ||| || || | ||| ||| ||||||| ||| Sbjct 28393 GCATAGGAGCCACGAGCAGACTGTTGCGGATACCGTGCTCTTTGATCTGCTCTCGAAGCG 28334 Query 78657 TAGGCCG-TCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCT 78715 | || ||||||| ||| | | || ||||||||| |||||||| |||| Sbjct 28333 TCTCCCACTCCCAAAGGTCAGAGGGGGTGACATTCCACATGTCGAACTGAAGGATTCCCT 28274 Query 78716 CGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATG 78775 | || || || || |||||||| |||| ||| | || | |||||| |||||||| |||| Sbjct 28273 CTGAAGCTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTCGCGAGTTC-CATG 28215 Query 78776 -ACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 |||| ||||| || ||||| | | ||||||||| ||| || |||| || ||| Sbjct 28214 GACTCAGTAAGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCTGACGAGCC 28155 Query 78835 TTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCG 78894 | | | ||||| | | || || || ||| |||| || || ||||| || || Sbjct 28154 TCAGGCGACTCGAAAGGCATGCGCAGAGCCAAGAATGCATCTGCAAGACCCTGAACACCA 28095 Query 78895 ATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTC 78954 | | | || ||||| || ||||||||||| || || ||| ||| ||||| |||| Sbjct 28094 AGACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTAGTTG 28035 Query 78955 CGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCG 79014 |||||||| ||||||||||||||| || ||||| || || |||| | || | Sbjct 28034 ACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTGGAGCTTCTTG 27975 Query 79015 AAATCAAAAT-GATTTCCTT-TGATGAAAGTCGGTAGGCA----CAGCGATGCCAGGTTG 79068 || | | | || | | || || || || |||| |||||| ||||||||| Sbjct 27974 AAGTTGTAGCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGAAGCCAGGTTG 27915 Query 79069 CACACGGCCGTCTCGTCCGG-GCT-AGAAACCTCGATGATTTCTGTGCACAAATTAGACG 79126 || || || ||| || || || || | || || || || ||||| | ||| || Sbjct 27914 CAAACAGCAACCTCATCGGGAGCGCAGTAT--TCAATAATCTCAGTGCAAAGATTGGAGC 27857 Query 79127 ACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 ||| || || | |||||||||||||||||| ||| || || |||||||| || Sbjct 27856 TGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAAAGCA 27797 Query 79187 TGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCC 79246 || | || | || ||||| || | ||| | || ||| | | | |||| | Sbjct 27796 TGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAGCTTCTGGGCAC 27737 Query 79247 GGACAACCTTCTTGT-ACC--GACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303 ||| | ||| ||| |||||| | ||| || ||| | | | || Sbjct 27736 GGAT---CGTCTGACGACCACGACCCTCCTTTTCATACTTCTCGTATAGGGCCTCAAACT 27680 Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363 |||| || ||| || | |||||| |||||||||| |||||||| || ||||| || Sbjct 27679 CCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAGTCCAGTTCT 27620 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 ||| ||||||||| || ||||||||| || ||||||||||| ||| ||| ||||| | Sbjct 27619 CGTTCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAGGTCTC 27560 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | ||| ||||| || | || || ||| || || || ||||| || | || || | Sbjct 27559 GTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCGAAGACATCAG 27500 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 |||||| ||||| |||||||| || || | ||| ||||||| ||| ||||| | | Sbjct 27499 AGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGATCAA 27440 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 | || | ||| ||||||||||| ||||| |||||||| | ||| || | || ||||| Sbjct 27439 CATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTGGATGTGCCGT 27380 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATG-TTCGAGCAGTGGATTCCGATGCCC 79662 | || ||| || | || | || |||||| || | || || ||||| || Sbjct 27379 TGGTACCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAAC-GTTGAGACCGATACCT 27321 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 || | | ||| ||||| || || |||||| || |||||||| || || || | Sbjct 27320 CCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATACCGTCAATGCTG 27261 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 || ||||||||| |||| |||||||| || | ||| | | | |||||||| ||| Sbjct 27260 TCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGGTACCGGCATTG 27201 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTT-TTGG 79818 || || || || | || || || |||||||| |||| Sbjct 27200 AATAGAGTGGGAGAAGCATGAGTAAAGAACTTGTTGG 27164 Score = 322 bits (356), Expect = 5e-83 Identities = 895/1364 (66%), Gaps = 34/1364 (2%) Strand=Plus/Plus Query 19157 CGAGTCCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACC 19216 || ||| |||||| ||| || ||| | | |||||||| || || || | || || Sbjct 27136 CGTGTCATCGAGACCTACAACTACATGTCCAACAAGTTCTTTACTCATGCTTCTCCCACT 27195 Query 19217 CTTTTCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAG 19276 || ||||| |||||||| | | | ||| | || || ||||| || | ||||||| Sbjct 27196 CTATTCAATGCCGGTACCCCCCAGGCTCAGCTCTCATCATGCTTCCTTGTCGATATGAAG 27255 Query 19277 GATGACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGG 19336 |||||||||||||| || |||||||| || |||||| || || ||||| ||| | Sbjct 27256 GATGACAGCATTGACGGTATCTACGATACTCTCAAGACCTGTGCCATGATCTCAAAGATG 27315 Query 19337 TCCGGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACA----CGAATCAA 19392 | || |||||||| || || | || ||| ||| |||| || | || Sbjct 27316 GCAGGAGGTATCGGTCTCAAC-GTTCA-----CCGCATTCGTGCTACAGGCTCGTA-CAT 27368 Query 19393 TG---GGACGAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACAC 19449 || | || ||||| | || | || ||| |||| ||||| || || ||||||||||| Sbjct 27369 TGCCGGTACCAACGGCACATCCAATGGAATCATCCCCATGCTGCGAGTGTTCAACAACAC 27428 Query 19450 GGCCAGGTACGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGA 19509 ||||| || || | ||||| ||| ||| ||| || | || || ||||| ||||| Sbjct 27429 TGCCAGATATGTTGATCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCTATCTATCTCGA 27488 Query 19510 GCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGA 19569 ||| |||||| | || ||| | || || || || || || ||| || || | || || Sbjct 27489 GCCCTGGCACTCTGATGTCTTCGAGTTTCTGGACCTTCGAAAGAATCACGGAAAGGAAGA 27548 Query 19570 GATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGT 19629 ||| || || ||||| ||| ||| ||||||| || || || |||||| || || Sbjct 27549 GATCCGTGCACGAGACCTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGCGCGT 27608 Query 19630 TGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGT 19689 ||||||| |||| | ||| || |||||||| |||| ||||||||||| | ||| Sbjct 27609 TGAGAAGAACGAGAACTGGACTCTCATGTGCCCTAACGAGTGCCCTGGCCTGGCTGACTG 27668 Query 19690 CTACGGCGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCG-GTTCAAGA 19748 ||||||||||| ||| | | | ||| || || | | |||| || | || Sbjct 27669 CTACGGCGAGGAGTTTGAGGCCCTATACGAGAAGTATGAAAAGGAGGGTCGTGGTC-GTC 27727 Query 19749 AGGTGGTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCA 19808 || | |||| |||| | | | ||| || ||||| || ||| |||||| || | Sbjct 27728 AGACGATCCGTGCCCAGAAGCTGTGGTACTCGATCCTCGAAGCCCAAACCGAGACTGGTA 27787 Query 19809 CACCGTACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCG 19868 || | |||| |||||||| || ||| ||| || ||||||||| | || Sbjct 27788 ACCCCTTCATGCTTTACAAGGATGCTTGCAACCGTAAGAGCAACCAGAAGAACCTGGGTA 27847 Query 19869 CGATCAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTG 19928 | ||| ||||| || || ||||| || || || | | || || ||| || Sbjct 27848 CTATCCGCAGCTCCAATCTTTGCACTGAGATTATTGAATACTGCGCTCCCGATGAGGTTG 27907 Query 19929 CCGTGTGTAATCTGGCGTCCCTG----TGCCTGCCGAC-----TTTCGTCAAGGCCTCCT 19979 | || || || ||||| || ||| |||| ||| || || || | ||| || Sbjct 27908 CTGTTTGCAACCTGGCTTCGCTGGCTCTGCCCGCCTACGTTGATTACGACGAGG---GCT 27964 Query 19980 CCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCG 20039 || | |||| || | |||| || || ||||| || |||||| ||||| || Sbjct 27965 GCTACAACTTCAAGAAGCTCCACGAAGTTACACGGGTTATCGTGCGTAACCTGAACCGTA 28024 Query 20040 TCATCGATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGC 20099 |||||||| |||| ||||| ||| ||| ||||| || ||||| || || | Sbjct 28025 TCATCGATGTCAACTACTACCCCGTTCAGGAGGCACGCAACAGCAACATGCGTCATCGAC 28084 Query 20100 CGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCG 20159 | || | | || || ||||| || || || | ||| || || || | | |||| Sbjct 28085 CCATTGGTCTTGGTGTTCAGGGTCTTGCAGATGCATTCTTGGCTCTGCGCATGCCTTTCG 28144 Query 20160 ACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC 20219 | || |||| || |||| || ||| ||||||||| | | ||||| || |||| Sbjct 28145 AGTCGCCTGAGGCTCGTCAGCTGAATAAGCAGATCTTCGAGACAATCTACCATGCCGCCC 28204 Query 20220 TCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGC 20279 | || || |||||||| || ||| | || || ||| |||| |||||||| || | Sbjct 28205 TTACTGAGTCCATGGAACTCGCGAAGGAGCAAGGTCCCTACCAGACCTTCAAGGGATCCC 28264 Query 20280 CCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGA-GTTTTGG 20338 | || || ||||| ||||| ||| ||||||||| ||||| ||| ||| || Sbjct 28265 CAGCTTCAGAGGGAATCCTTCAGTTCGACATGTGGAATGTCACCCCCTCTGACCTTTGGG 28324 Query 20339 AGCG-----CCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCG 20393 || | | || | ||||||| ||||| | |||||| ||||||| | Sbjct 28325 AGTGGGAGACGCTTCGAGAGCAGATCAAAGAGCACGGTATCCGCAACAGTCTGCTCGTGG 28384 Query 20394 CGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGT 20453 | || ||||| || ||| ||| | |||||| |||| ||||| || |||||||| | Sbjct 28385 CTCCTATGCCCACAGCCAGTACCTCTCAGATCTTGGGCAACAATGAATGCTTCGAGCCCT 28444 Query 20454 ACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 |||| |||||||||||| || ||| ||||| || |||||| Sbjct 28445 ACACATCCAACATCTACTCCCGACGTGTTCTGGCTGGAGAGTTC 28488 >seq9 Length=1081052 Score = 118 bits (130), Expect = 1e-21 Identities = 304/454 (67%), Gaps = 12/454 (3%) Strand=Plus/Minus Query 59971 CATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGT 60030 |||| || || ||||| | || || || ||| || || ||||||||| ||| | | Sbjct 1020442 CATTCGCTCAGCGTCTTGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGTGGTGCTT 1020383 Query 60031 TCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACG 60090 || | ||||||||||| | || |||||||| || ||||| || || | |||||||||| Sbjct 1020382 TCGCTTCTATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACG 1020323 Query 60091 AGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCTCTATTCACAC 60149 ||||||| ||||| |||||||| || || || || || || | ||| | || || Sbjct 1020322 AGCTGATCTCCCGTGACGAGGGTCTTCACACTGACTTCGC-TTGCCTACTCCACTCCCAT 1020264 Query 60150 CTATTGGAAAAATGCCCTTCCAAGGA---TATTCACAAGATTGTTCAGTGGGCTTGTGA- 60205 | || | || || | |||||| ||| | || | ||| || || | Sbjct 1020263 C---TGAACAACCGCGCAAGCAAGGAGGTCATTGA-GAGCATCATCACTGACGCCGTCAC 1020208 Query 60206 AGTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGCTGG 60265 | |||| |||||| | || || || ||||| ||| | | || ||| |||| Sbjct 1020207 CATTGAGAAGGAGTTCTTGACTGAGGCCCTTCCTTGCGCCATGCTGGGCATGAACGCCAA 1020148 Query 60266 AGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCTCATGGCCCAGTTTGGAGAAGG 60325 |||| ||||||||| ||||||| || ||||| || ||| | | | | || | Sbjct 1020147 CCTGATGAAGCAGTACATCGAGTTTGTTGCCGACCGTCTTCTGG-TCGCTCTCGGCAACG 1020089 Query 60326 ACCA-ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGA 60384 || | | ||| || ||||| ||||||| ||||||| |||||| | | ||| | Sbjct 1020088 ACAAGGTGTACAAGTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGAGGCA 1020029 Query 60385 AGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 | ||||||||||| |||||||| ||||| || || Sbjct 1020028 AAACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 1019995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519403887280