Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq127 212 7e-50 seq6 197 2e-45 seq4 149 7e-31 seq87 140 4e-28 seq9 98.7 1e-15 seq2 95.1 1e-14 >seq127 Length=80722 Score = 212 bits (234), Expect = 7e-50 Identities = 1119/1759 (64%), Gaps = 62/1759 (4%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || || |||||||||||||| |||||||| ||| |||||||| | |||| Sbjct 28814 GCCTGAGTACGAAGATAGTACATGCCAGTCTTGAGTCCCAATTTCCAGCCAGCAAAGTGC 28755 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 ||| | | ||| | | || ||| | || ||| |||||| ||||| ||||| || Sbjct 28754 ATACTGGTAATCTTGCCCATTGAGGGATCCTTCATATGGATGTTGAGAGATTGAGATTGG 28695 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAA-TTGACTTTTGTGGAATTTCCCA 80210 |||||||| || ||||| || ||||| | | || ||||| || | | ||| ||||| Sbjct 28694 TCAATGAAAGCACCTCGATCGGCGGCCATCTGCACAACTTGACGTT-GAGAAATCTCCCA 28636 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACT 80264 || || || | |||| || || || || |||| | ||||| | Sbjct 28635 GACGGTCTTGTAGAGGGCCTTG---AGGTCATCAGGGATGTTGGGGATGTTTTGGATCGA 28579 Query 80265 GCCACCGTCCTTTACAATTTGATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAG 80324 || || | |||| | || |||| || | ||| | || | || || Sbjct 28578 ACCTTGTTCAGCAATAATTCGGTTCTTCATGGCATCGGACCACAAGCCCAACTCAACAAG 28519 Query 80325 ATCTTTCACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAG 80381 |||||| | || | | ||| | | || ||||||| || || || || Sbjct 28518 ATCTTTTAAGAGCCAGGGGTTGACGACCTGGA---ACTCTCCAGCCAGAACACGTCGGGA 28462 Query 80382 ATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCT 80441 || | ||| | ||||| ||||| || || ||||| || | |||||||| || || Sbjct 28461 GTAGATGTTGGATGTGTAGGGCTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACT 28402 Query 80442 CGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC 80501 || || ||||| || | || | ||| || || | ||||||| ||||| | ||| Sbjct 28401 GGCTGTGGGCATAGGAGCCACGAGCAGACTGTTGCGGATACCGTGCTCTTTGATCTGCTC 28342 Query 80502 GCGCAAA---TCTGAC---CAAAAATCAACCCCAACGCTGTGACC--CCACATGTCGTGC 80553 || | || || |||| ||| | | ||||| |||||||||| | Sbjct 28341 TCGAAGCGTCTCCCACTCCCAAAGGTCAG-----AGGGGGTGACATTCCACATGTCGAAC 28287 Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613 || | ||| ||||| || || || || ||| ||| |||| ||| || || | | ||| Sbjct 28286 TGAAGGATTCCCTCTGAAGCTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTC 28227 Query 80614 GCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTC 80673 || || || ||||| ||||||| || || || || ||| |||| ||| ||| Sbjct 28226 GCGAGTTCCATGGACTCAGTAAGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTC 28167 Query 80674 ACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733 | || |||| || ||||| | || || || || ||| | || || || Sbjct 28166 AGCTGACGAGCCTCAGGCGACTCGAAAGGCATGCGCAGAGCCAAGAATGCATCTGCAAGA 28107 Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAAT 80792 |||||||| || | | || || || || ||| |||| | | || |||||| ||| Sbjct 28106 CCCTGAACACCAAGACCAATGGGTCGATGACGCATGTT-GCTGTTGCGTGCCTCCTGAAC 28048 Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852 ||||| |||| |||||||| ||||||||||| || | |||||||||||| || Sbjct 28047 GGGGTAGTAGTTGACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTC 27988 Query 80853 ATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-----TCA-CAAATGCCGGAAGGCTCAG 80906 || || |||| |||| | | | | | | ||| | | || || || ||| Sbjct 27987 GTGGAGCTTCTTGAAGTTGTAGCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAG 27928 Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 || ||||| ||||| || || ||||| || | | | | || | || || ||||| Sbjct 27927 CGAAGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCAGTATTCAATAATCTCAGTGCA 27868 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 | ||| || || ||||||||||| |||||||| ||| ||||||||| || Sbjct 27867 AAGATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATC 27808 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| |||| | ||| |||| |||||| || | | |||||| | || ||| | Sbjct 27807 CTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACAG 27748 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | || || | || || || || ||||||| |||| | Sbjct 27747 CTTCTGGGCACGGATCGTCTGACGACCACGACCCTCCTTTTCATACTTCTCGTATAGGGC 27688 Query 81147 GTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 || |||| | |||| | ||| ||| ||| | |||||||||||||||||||| || Sbjct 27687 CTCAAACTCCTCGCCGTAGCAGT-CAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAG 27629 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 ||||| || ||||| || ||||||||| ||||||||||| || || || Sbjct 27628 TCCAGTTCTCGTTCTTCTCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGA 27569 Query 81266 ACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324 ||||||| || ||| || ||| || | || || || || | || ||||| || Sbjct 27568 ACAGGTCTCGTGCA-CGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCG 27510 Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCA 81381 | || || | ||||| ||||| ||||| | || | | || ||| |||| Sbjct 27509 AAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTTGTTGCCA 27450 Query 81382 CCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCT 81441 ||||| | || || | |||||| ||| || || |||| ||| |||||||| |||| Sbjct 27449 CCCTGATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTG 27390 Query 81442 GACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGC--TGA---TTG 81496 || ||||| ||||| | || ||| || | || || | ||| ||| ||| Sbjct 27389 GATGTGCCGTTGGTACCGGCAATGTACGAGCCTGTAGCACGAA---TGCGGTGAACGTTG 27333 Query 81497 AAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAA 81556 |||||||| || |||| | |||||| ||| ||||| || | || || || | Sbjct 27332 --AGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAGA 27275 Query 81557 TTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTT 81616 | || || ||||| || | ||||| || | | ||| || ||| | |||| || | Sbjct 27274 TACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGA--GCCTG 27217 Query 81617 TTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC-GGTTTGACATCA 81673 | | ||||||||||| || || || | || ||| | ||| ||| ||| ||||| Sbjct 27216 GGGGGTACCGGCATTGAATAGAGTGGGAGAAGCATGAGT-AAAGAACTTGTTGGACATGT 27158 Query 81674 GGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCA 81733 || ||||| || |||| ||| ||| | ||||| |||||| | || ||||||| Sbjct 27157 AGTTGTAGGTCTCGATGACACGTTCAATGTTATCACCCCAAATACCCACAGAAACACGCA 27098 Query 81734 TAAACATGTACTG-GGGCG 81751 | | ||||| || ||||| Sbjct 27097 TGATCATGTGTTGTGGGCG 27079 >seq6 Length=1479970 Score = 197 bits (218), Expect = 2e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||||||||| || ||||||||||| ||||| | Sbjct 796131 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCT 796072 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || |||||||||||||||||||||||||| ||||| Sbjct 796071 GATACCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCAA 796012 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| ||||||||||| || ||||||| || ||||| | ||||| || Sbjct 796011 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 795952 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || || || || ||| | || ||||| ||||| Sbjct 795951 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTCCGCCTTCGTGGTGG 795905 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| |||||||| || || || || |||||| Sbjct 795617 ATGCAGATTTTCGTCAAGACCCTCACCGGAAAGACTATCACACTGGAAGTCGAGTCATCG 795558 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| ||||| | || || ||||| |||||||| || ||||| |||||| Sbjct 795557 GACACGATTGACAATGTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCTCCTGACCAG 795498 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || ||||| ||||| || || || | |||||||| | ||||| || Sbjct 795497 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAAGACGGCCGTACCCTTTCTGACTACAAC 795438 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| ||||| ||||| || || | ||||| || || || || Sbjct 795437 ATTCAGAAGGAGTCCACCCTTCACCTGGTTCTCCGTCTCCGTGGCGGCCA 795388 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||||||||| || || || ||||| || || ||| | ||| | Sbjct 795833 GTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAATCTTCTGACACCATCGAC 795774 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || ||||||||||||||||| |||||||| ||||| ||||| || || Sbjct 795773 AACGTTAAGTCGAAGATTCAGGACAAGGAGGGTATTCCTCCCGACCAACAGCGCCTGATC 795714 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 |||||||| ||||| || ||||||| || ||||| | ||||| || |||| |||||| Sbjct 795713 TTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAA 795654 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||| || || | || | ||||| || ||||| Sbjct 795653 TCCACCCTCCACTTGGTGCTCCGTCTGCGTGGTGG 795619 >seq4 Length=1629322 Score = 149 bits (164), Expect = 7e-31 Identities = 142/182 (78%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 924891 CTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 924950 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | ||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 924951 TGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 925010 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||||||| || |||| || Sbjct 925011 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCAGACTACAACATCCAGAA 925070 Query 27594 GG 27595 || Sbjct 925071 GG 925072 >seq87 Length=157873 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || |||||||| || || ||||| ||||| Sbjct 70425 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCTTCC 70484 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| || || || |||||| Sbjct 70485 GACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 70544 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 70545 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 70604 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || || || || | || || || ||||| Sbjct 70605 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTGCGTGGTGG 70651 >seq9 Length=1081052 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 64713 TCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTC 64772 ||||||||| | || || ||| || || || || ||||| ||| | ||| ||| Sbjct 1020435 TCAGCGTCTTGTTGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGTGGTGCTTTCGCTTC 1020376 Query 64773 TATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGAT 64832 |||||||||| | || ||||| || |||||||| ||||| | || || ||||||||||| Sbjct 1020375 TATTTTCTGGTTGAAGAAGCGTGGTCTGATGCCTGGTCTCACCTTCTCCAACGAGCTGAT 1020316 Query 64833 CTCTCGGGACGAGGGGCTCCAC 64854 ||| || |||||||| || ||| Sbjct 1020315 CTCCCGTGACGAGGGTCTTCAC 1020294 >seq2 Length=2392652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 276/423 (65%), Gaps = 8/423 (2%) Strand=Plus/Minus Query 31984 GACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCG 32043 || || || || ||| ||||| ||||| || || | || ||||| ||| || | Sbjct 2318266 GATGGACTGAAACCTGGTCAGCGAAAGGTCATGTATGGATGTTTCAAGCGTAACTTGACC 2318207 Query 32044 AGTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCAC 32103 | |||| |||||| || | || || ||| | | || || || || ||||| || Sbjct 2318206 AAGGACAAGAAGGTAGCCGAACTCAGTGGTTACATCTCCGAACACACAGCTTATCATCAT 2318147 Query 32104 GGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAAT 32163 || || | ||||||||| || ||||| |||||||||||| || | || | || Sbjct 2318146 GGAGATGTCTCGCTCCAGCAGACAATTGTTGGCCTTGCTCAGAATTTCATTGGATCTAAC 2318087 Query 32164 AACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGAT 32223 || | |||| | ||||| ||| | || || |||| || || || ||| ||| Sbjct 2318086 AATGTCAACTGTTTGGAGCCCAGCGGAAACTTCGGCTCCCGTCTTGCTGGAGGCTCCGAT 2318027 Query 32224 GCTGCGAGCTCCCGTTACATCTTCAC----CCGTCTCGCACCTTCGACGCGCAAGATTTT 32279 || || || |||||||||| || || | ||||| |||||| |||| ||| | || Sbjct 2318026 GCCGCCAGTCCCCGTTACATTTTTACTAGACTGTCTC---CCTTCG-CGCGAAAGGTATT 2317971 Query 32280 CGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCC 32339 | | || | ||| || || ||| | | | | ||| ||||| | || | ||||| Sbjct 2317970 CCATCCTTTGGATGAGCCGAACCTCGACTTTCAATATGACGACGGGAATCGCATTGAGCC 2317911 Query 32340 GGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAAC 32399 | |||| || || |||| ||| | ||||| |||||||| || || ||||| || Sbjct 2317910 CACGACCTACTTCCCTGTTATTCCAATGGTGTTGGTTAACGGTGCCGATGGTATCGGTAC 2317851 Query 32400 GGG 32402 || Sbjct 2317850 TGG 2317848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304789571440