Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq142 143 2e-29 >seq142 Length=63576 Score = 143 bits (158), Expect = 2e-29 Identities = 219/305 (72%), Gaps = 8/305 (3%) Strand=Plus/Plus Query 34321 GGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--C 34378 ||| || ||||||||||||| ||||||| || || || || ||||||| || | | Sbjct 35485 GGGCGTCAAGATCTGGGACGGCAACGGGTCGCGCGAGTTCCTCGACAAGCTCGGCCTGAC 35544 Query 34379 CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGG 34438 ||| ||| |||| ||||||| ||||||| |||||||||||||||||| | ||||||||| Sbjct 35545 CCA--TCGCGAGGTGGGCGACCTGGGCCCCGTCTACGGGTTCCAGTGGCGGCACTTTGGG 35602 Query 34439 GCGGAGTATCGGGGGAGCGAAG-CGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGT 34496 || ||||| || | | ||| | ||||| | || ||||| | |||||||| || | Sbjct 35603 GCCGAGTA-CGTCGACTCCAAGACCGACTACACCGGCCAGGGCGTCGACCAGCTCGCCG- 35660 Query 34497 ACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGA 34556 | | ||| ||| | ||||||| | ||| | |||| | ||| ||||||| Sbjct 35661 AGCTCATCCACAAGCTCCGCACGAACCCTTACGACCGCCGGATGATCCTGTCGGCGTGGA 35720 Query 34557 ACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACG 34616 |||| ||||| | || |||| ||| ||||| ||||||| || ||| ||||||| Sbjct 35721 ACCCCAAGGACATGCCCAACATGGTGCTGCCCCCCTGCCACATGTTCGCCCAGTTCTACG 35780 Query 34617 TCGCG 34621 || || Sbjct 35781 TCTCG 35785 Score = 143 bits (158), Expect = 2e-29 Identities = 219/305 (72%), Gaps = 8/305 (3%) Strand=Plus/Minus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| || ||||||| ||||| ||| |||| || | ||||| Sbjct 35785 CGAGACGTAGAACTGGGCGAACATGTGGCAGGGGGGCAGCACCATGTTGGGCATGTCCTT 35726 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843 ||||||||||| ||| | |||| | ||| | ||||||| | ||| ||| Sbjct 35725 GGGGTTCCACGCCGACAGGATCATCCGGCGGTCGTAAGGGTTCGTGCGGAGCTTGTGGAT 35666 Query 6844 CACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCG-CTTCGCTCCCCCGATAC 6901 | | | || |||||||| | ||||| || | ||||| | ||| | | || ||| Sbjct 35665 GAGCT-CGGCGAGCTGGTCGACGCCCTGGCCGGTGTAGTCGGTCTTGGAGTCGACG-TAC 35608 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || ||||||||||| | |||||||||||||||||| ||||||| ||||||| |||| ||| Sbjct 35607 TCGGCCCCAAAGTGCCGCCACTGGAACCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGA 35548 Query 6962 GATGGG--AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCA 7019 |||| | || ||||||| || || || || ||||||| ||||||||||||| | Sbjct 35547 --TGGGTCAGGCCGAGCTTGTCGAGGAACTCGCGCGACCCGTTGCCGTCCCAGATCTTGA 35490 Query 7020 CCCCC 7024 | ||| Sbjct 35489 CGCCC 35485 Score = 107 bits (118), Expect = 2e-18 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||||||||| || || || || | || ||||| | || || ||||||||||| || || Sbjct 35863 CTGCCAGCTGTACCAGCGGTCCTGCGATATGGGCCTGGGCGTCCCGTTCAACATCGCCAG 35922 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| ||| ||||| |||| || ||| | |||| || ||| || | Sbjct 35923 CTACGCGCTGCTGACGCACATGCTCGCACACGTCTGCGACATGGTGCC-GGGCAG-TCTC 35980 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 | |||| |||| || ||||| |||||||| ||||| |||| |||| || ||| Sbjct 35981 ACCCACGTCATGGGCGACGCGCACGTCTACCTGGACCACGTCGACGCGCTCAGGGAGCAG 36040 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCT 34845 ||| | ||||| ||||| |||||||| |||| Sbjct 36041 CTGGAGCGAGAACCCCGGCCGTTCCCTGAGCT 36072 Score = 107 bits (118), Expect = 2e-18 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 6500 AGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTTC 6559 |||| |||||||| ||||| ||||| | |||||| || |||| |||| ||||| | Sbjct 36072 AGCTCAGGGAACGGCCGGGGTTCTCGCTCCAGCTGCTCCCTGAGCGCGTCGACGTGGTCC 36013 Query 6560 AGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACGA 6617 ||||||| ||||| || |||| |||| | | || ||| || |||| | || Sbjct 36012 AGGTAGACGTGCGCGTCGCCCATGACGTGGGTGAGA-CTGCCC-GGCACCATGTCGCAGA 35955 Query 6618 CATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACC 6677 | || |||| ||||| ||| ||||| ||||| || || ||||||||||| || || | | Sbjct 35954 CGTGTGCGAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCCAGGC 35895 Query 6678 CCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||| || | || || || || ||||||||| Sbjct 35894 CCATATCGCAGGACCGCTGGTACAGCTGGCAG 35863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448257990218640