Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq142 109 4e-19 >seq142 Length=63576 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 29612 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAG 29671 || || || | ||| || | ||| ||||| ||| |||| || |||||||| |||||| Sbjct 36066 GGGAACGGCCGGGGTTCTCGCTCCAGCTGCTCCCTGAGCGCGTCGACGTGGTCCAGGTAG 36007 Query 29672 ACGTGAGCATCTCCCAGGGTGTGGACAA-ACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29730 ||||| || || |||| | |||| | ||| ||||| | | || |||||| || Sbjct 36006 ACGTGCGCGTCGCCCATGACGTGGGTGAGACTG-CCCGGCACCATGTCGCAGACGTGTGC 35948 Query 29731 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTC 29790 | ||||| ||| || || | ||||||||||||||| || || || || || ||||| || Sbjct 35947 GAGCATGTGCGTCAGCAGCGCGTAGCTGGCGATGTTGAACGGGACGCCCAGGCCCATATC 35888 Query 29791 CCCTGACCTCTGGTAGAGCTGGCA 29814 | |||| |||||| |||||||| Sbjct 35887 GCAGGACCGCTGGTACAGCTGGCA 35864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406159304260282