Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09]
787 sequences; 55,184,262 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq127 205 1e-47
>seq127
Length=80722
Score = 205 bits (226), Expect = 1e-47
Identities = 1051/1650 (64%), Gaps = 41/1650 (2%)
Strand=Plus/Minus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||| ||||||||||| ||||| || || |||| |||| || || ||||| ||
Sbjct 28808 GTACGAAGATAGTACATGCCAGTCTTGAGTCCCAATTTCCAGCCAGCAAAGTGCATACTG 28749
Query 76872 GTCAGTTTGG--AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGA 76929
|| | ||| | | | ||||| ||||| || || | || ||| ||| || |
Sbjct 28748 GTAATCTTGCCCATTGAG--GGATCCTTCATATGGATGTTGAGAGATTGAGATTGGTCAA 28691
Query 76930 TGAAAGCTCCTCTATCAGCCGCCATTTTTATAA-TGGTCTTTTGAGGAATTTCCCAAATA 76988
||||||| |||| ||| || ||||| | | || | | | || ||| ||| ||||| |
Sbjct 28690 TGAAAGCACCTCGATCGGCGGCCATCTGCACAACTTGACGTT-GAGAAATCTCCCAGACG 28632
Query 76989 GTTTTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCA 77045
|| ||| | | |||| ||||| || | ||| | | ||||| || |||||
Sbjct 28631 GTCTTGTAGAGGGCCTTGAGGTCATCAGGGATGTTGGGGATGTTTTGGATCGAACCTTGT 28572
Query 77046 TCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTA 77105
|| | |||||| ||||| || |||| |||||| | ||| | | || |
Sbjct 28571 TCAGCAATAATTCGGTTCTTCATGGCATCGGACCACAAGCCCAACTCAACAAGATCTTTT 28512
Query 77106 AGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTA 77165
| ||| || || || | || || ||||||| || || | || | ||| || ||
Sbjct 28511 AAGAGCCAGGGGTTGACGACCTGGAACTCTCCAGCCAGAACACGTCGGGAGTAGATGTTG 28452
Query 77166 CTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGC 77225
|| || || || | |||||||||| ||||| || |||| ||| || || |||
Sbjct 28451 GATGTGTAGGGCTCGAAGCATTCATTGTTGCCCAAGATCTGAGAGGTACTGGCTGTGGGC 28392
Query 77226 ATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATAT 77285
||||| ||||| | | ||| || | || ||| || | |||| | ||| ||
Sbjct 28391 ATAGGAGCCACGAGCAGACTGTTGCGGATACCGTGCTCTTTGATCTGCTCTCGAAGCGTC 28332
Query 77286 TTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTA 77345
| ||| |||||||| || || || |||| ||| | ||| | || || ||||| |
Sbjct 28331 TCCCACTCCCAAAGGTCAGAGGGGGTGACATTCCACATGTCGAACTGAAGGATTCCCTCT 28272
Query 77346 CTAGCATATGATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACA--- 77401
||| ||||| || | || | || || |||| || ||| || ||||| ||
Sbjct 28271 GAAGCTGGGGATCCCTTGAAGGTCTGGTAGGGACCTTGCTCCTTC-GCGAGTTC-CATGG 28214
Query 77402 ACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGC 77461
|||| | | || | | || ||||| ||||| |||| |||||| || | | ||
Sbjct 28213 ACTCAGTA--AGGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTATTCAGCTGACGAGC 28156
Query 77462 TTCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCC 77521
||| || || || | | | | || |||||||| | |||||||| ||
Sbjct 28155 CTCAGGCGACTCGAAAGGCATGCGCAGAGCCAAGAATGCATCTGCAAGACCCTGAACACC 28096
Query 77522 AATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATT 77581
|| |||||| |||| ||| | | | ||| | || || ||| || || || ||
Sbjct 28095 AAGACCAATGGGTCGATGACGCATGTTGCTGTTGCGTGCCTCCTGAACGGGGTAGTAGTT 28036
Query 77582 AATGTCTATAATTTTATTGAGATTTCTAACAACTAC---TTTAACCACGTCCTTTAGTTT 77638
| || || || || || || | || | || | |||| ||| || ||
Sbjct 28035 GACATCGATGATACGGTTCAGGTTACGCACGATAACCCGTGTAACTTCGTGG---AGCTT 27979
Query 77639 AAGAAAATCAAATCTTCCATCTA--TAACAAACAT----GTTCAAAGCTATAGATGCTAG 77692
|| | | | || || ||| ||| | | || ||| | || || ||
Sbjct 27978 CTTGAAGTTGTAGCAGCCCTCGTCGTAATCAACGTAGGCGGGCAGAGCCAGCGAAGCCAG 27919
Query 77693 ATTACAAACTGCTACCTCATTAGCGTTGGCA-TATTGTATTATCTCGGTACATAGATTAC 77751
|| ||||| || ||||||| | | ||| |||| || ||||| || || |||||
Sbjct 27918 GTTGCAAACAGCAACCTCATCGG-GAGCGCAGTATTCAATAATCTCAGTGCAAAGATTGG 27860
Query 77752 TACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAA 77811
| |||||| ||||| || | ||||||||||| ||||| | ||||| ||||
Sbjct 27859 AGCTGCGGATAGTACCCAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCATCCTTGTAAA 27800
Query 77812 GAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG 77871
| || || || | || || || | || | ||||| || || | ||| | | ||| |
Sbjct 27799 GCATGAAGGGGTTACCAGTCTCGGTTTGGGCTTCGAGGATCGAGTACCACA-GCTTCTGG 27741
Query 77872 -CTTTTATCATA-GATTTGTATCGCCTCTCTCTTTCATATTGA--GTATATAGCCGTTCA 77927
| ||| | || | || | ||| ||||||| | ||||| ||| |||
Sbjct 27740 GCACGGATCGTCTGACGACCA-CGACCCTCCTTTTCATACTTCTCGTATAGGGCC--TCA 27684
Query 77928 AATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAG 77987
|| || || || | ||| ||| |||||||| || || |||||||| | | ||||
Sbjct 27683 AACTCCTCGCCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTAGGGCACATGAGAGTCCAG 27624
Query 77988 T-CACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 78046
| | | ||||| | ||| || ||||| ||||||||||| ||||| ||||| | || ||
Sbjct 27623 TTCTCGTTCTTC-TCAACGCGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAG 27565
Query 78047 ATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAAT 78106
||||| | | ||||| ||||| ||||||| ||| || |||||||| | |
Sbjct 27564 GTCTCGTGCACGGATCTCTTCCTTTCCGTGATTCTTTCGAAGGTCCAGAAACTCGAAGAC 27505
Query 78107 ATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTG 78166
|||||| ||||| || || ||||| || || | | || || || || || || |||||
Sbjct 27504 ATCAGAGTGCCAGGGCTCGAGATAGATAGCAAAGGCACCGGGGCGCTTGTTGCCACCCTG 27445
Query 78167 ATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGT 78226
||| | ||||||||| ||||| || | |||| || ||| || || || || || |||||
Sbjct 27444 ATCAACATATCTGGCAGTGTTGTTGAACACTCGCAGCATGGGGATGATTCCATTGGATGT 27385
Query 78227 TCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTAT 78286
|| || || || | ||| || || | || ||||| || | | || ||
Sbjct 27384 GCCGTTGGTACCGGCAATGTACGAGCCTGTAGCACGAATGCGGTGAACGTTGAGACCGAT 27325
Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346
|||||||||||||| || || | || || || | |||||||||||||| || ||
Sbjct 27324 ACCTCCTGCCATCTTTGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATACCGTCAAT 27265
Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406
||||||||| |||| | | ||| || || || | ||| || || || ||
Sbjct 27264 GCTGTCATCCTTCATATCGACAAGGAAGCATGATGAGAGCTGAGCCTGGGGGGTACCGGC 27205
Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAA 78436
||| |||| || ||||| ||||| |||||
Sbjct 27204 ATTGAATAGAGTGGGAGAAGCATGAGTAAA 27175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694661966195680
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