Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clonostachys_20rosea_20[genbank_20GCA_5F001640285.1_202016-05-09] 787 sequences; 55,184,262 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq127 199 6e-46 >seq127 Length=80722 Score = 199 bits (220), Expect = 6e-46 Identities = 1136/1794 (63%), Gaps = 53/1794 (3%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| || | | || | | ||||| ||||||||||| ||||| || || Sbjct 28838 GTGAACTGAATAGGGGCCGCAGCAGCCTGAGTACGAAGATAGTACATGCCAGTCTTGAGT 28779 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGG--AATAACTCGGATCGGCTA 75494 |||| |||| || || ||||| || || | ||| | | | ||||| | Sbjct 28778 CCCAATTTCCAGCCAGCAAAGTGCATACTGGTAATCTTGCCCATTGAG--GGATCCTTCA 28721 Query 75495 TATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTA 75554 |||| || || | || ||| ||| || |||||||| |||| ||| || ||||| | | Sbjct 28720 TATGGATGTTGAGAGATTGAGATTGGTCAATGAAAGCACCTCGATCGGCGGCCATCTGCA 28661 Query 75555 TAA-TGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGA 75613 || | | | || ||| ||| ||||| | || ||| | | |||| ||||| || Sbjct 28660 CAACTTGACGTT-GAGAAATCTCCCAGACGGTCTTGTAGAGGGCCTTGAGGTCATCAGGG 28602 Query 75614 AGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCA 75670 | || | | ||||| || || || |||| |||||| ||||| || |||| Sbjct 28601 ATGTTGGGGATGTTTTGGATCGAACCTTGTTCAGCAATAATTCGGTTCTTCATGGCATCG 28542 Query 75671 TTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCT 75730 |||||| ||| | | || | | ||| || || || | || || ||| Sbjct 28541 GACCACAAGCCCAACTCAACAAGATCTTTTAAGAGCCAGGGGTTGACGACCTGGAACTCT 28482 Query 75731 CCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 75790 |||| || || | ||| | ||| || || || || || || | |||||||||| Sbjct 28481 CCAGCCAGAACACGTCGGGAGTAGATGTTGGATGTGTAGGGCTCGAAGCATTCATTGTTG 28422 Query 75791 CCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGA 75850 ||||| || |||| || || || |||||||| ||||| | | ||| || | || | Sbjct 28421 CCCAAGATCTGAGAGGTACTGGCTGTGGGCATAGGAGCCACGAGCAGACTGTTGCGGATA 28362 Query 75851 CCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACA 75910 || || | |||| | ||| || | ||| |||||||| || || || ||| Sbjct 28361 CCGTGCTCTTTGATCTGCTCTCGAAGCGTCTCCCACTCCCAAAGGTCAGAGGGGGTGACA 28302 Query 75911 TCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAA 75970 | ||| | ||| | || || ||||| | ||| ||||| || | || | ||| Sbjct 28301 TTCCACATGTCGAACTGAAGGATTCCCTCTGAAGCTGGGGATCCCTTGAAGGTCTGGTAG 28242 Query 75971 GTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTC--TAACG-CACCGTAATAAATTGTT 76027 | || | || | || ||||| || | | ||| ||| | | | | || ||||| Sbjct 28241 GGACCTTGCTCCTTCGCGAGTTC-CA--TGGACTCAGTAAGGGCGGCATGGTAGATTGTC 28185 Query 76028 TCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGA 76087 ||||| |||| |||||| || | | || ||| | || ||||| | | | Sbjct 28184 TCGAAGATCTGCTTATTCAGCTGACGAGCCTCAGGCGACTCGAAAGGCATGCGCAGAGCC 28125 Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147 | ||||||||||| || |||||||| |||| |||||| |||| ||| | | | ||| Sbjct 28124 AAGAATGCATCTGCAAGACCCTGAACACCAAGACCAATGGGTCGATGACGCATGTTGCTG 28065 Query 76148 ATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207 | || || ||| ||||| || || | ||| || || || || || | || Sbjct 28064 TTGCGTGCCTCCTGAACGGGGTAGTAGTTGACATCGATGATACGGTTCAGGTTACGCACG 28005 Query 76208 ACTAC---TTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACAAAC 76264 | || | |||| ||| || || || | | || || || || | Sbjct 28004 ATAACCCGTGTAACTTCGTGG---AGCTTCTTGAAGTTGTAGCAGCCCTCG-TCGTAATC 27949 Query 76265 ATATTA-------AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 | || ||||| | || || || || ||||| || ||||||| | | | Sbjct 27948 AACGTAGGCGGGCAGAGCCAGCGAAGCCAGGTTGCAAACAGCAACCTCATCGGGAGCGCA 27889 Query 76318 ATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTT 76377 |||| || ||||| ||||| ||||| | |||||| || || || | ||||| Sbjct 27888 GTATTCAATAATCTCAGTGCAAAGATTGGAGCTGCGGATAGTACCCAGGTTCTTCTGGTT 27829 Query 76378 GCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437 |||||| ||| || | ||||| ||||| | || || | ||||| || | || | Sbjct 27828 GCTCTTACGGTTGCAAGCATCCTTGTAAAGCATGAAGGGGTTACCAGTCTCGGTTTGGGC 27769 Query 76438 TTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATA-GATTTGTATCGCTTCTCT 76495 ||||| || || | ||| | | ||| | | || | || | || ||| Sbjct 27768 TTCGAGGATCGAGTACCACA-GCTTCTGGGCACGGATCGTCTGACGACCA-CGACCCTCC 27711 Query 76496 CTTTCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAG 76553 ||||||| || | ||||| || ||||| || || || | ||| ||| |||| Sbjct 27710 TTTTCATACTTCTCGTATAGGGCC--TCAAACTCCTCGCCGTAGCAGTCAGCCAGGCCAG 27653 Query 76554 GACATTCATTCGGACACATCAATGACCACT-CACCATCTTCCTTAACCCGTTTCATAAAG 76612 | || || || || ||||| | | ||| | | | ||||| | ||| || ||||| ||| Sbjct 27652 GGCACTCGTTAGGGCACATGAGAGTCCAGTTCTCGTTCTTC-TCAACGCGCTTCATGAAG 27594 Query 76613 AGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTA 76672 |||||||| ||||| ||||| | || || ||||| | | ||||| ||||| | Sbjct 27593 AGATCAGGGATCCACAGAGCCAGGAACAGGTCTCGTGCACGGATCTCTTCCTTTCCGTGA 27534 Query 76673 TTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCC 76732 |||||| ||| || || ||||| | | |||||| ||||| || || ||||| || || Sbjct 27533 TTCTTTCGAAGGTCCAGAAACTCGAAGACATCAGAGTGCCAGGGCTCGAGATAGATAGCA 27474 Query 76733 ATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACT 76792 | |||| || || || || || |||||||| | ||||||||||||||| || | ||| Sbjct 27473 AAGGCACCGGGGCGCTTGTTGCCACCCTGATCAACATATCTGGCAGTGTTGTTGAACACT 27414 Query 76793 CTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACAT 76852 | || ||| || || || || || ||||| || || || || | ||| || || Sbjct 27413 CGCAGCATGGGGATGATTCCATTGGATGTGCCGTTGGTACCGGCAATGTACGAGCCTGTA 27354 Query 76853 GCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912 |||||||| || || || || ||||||||||| || ||||| | |||||| Sbjct 27353 GCACGAATGCGGTGAACGTTGAGACCGATACCTCCTGCCATCTTTGAGATCATGGCACAG 27294 Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAG 76972 || | || || ||||| || || || || |||||| |||| | | ||| || || Sbjct 27293 GTCTTGAGAGTATCGTAGATACCGTCAATGCTGTCATCCTTCATATCGACAAGGAAGCAT 27234 Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 || | ||| || || || ||||| || | || ||||| |||||||| || Sbjct 27233 GATGAGAGCTGAGCCTGGGGGGTACCGGCATTGAATAGAGTGGGAGAAGCATGAGTAAAG 27174 Query 77033 CATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTAT------ATCCCATTG 77085 | || | || | |||| ||||| || || || || ||| || | |||| Sbjct 27173 AACTTGTTGGACATGTAG-TTGTAGGTCTCGATGACACGTTCAATGTTATCACCCCA--- 27118 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTT 77139 ||| || |||| |||||||| | ||| || || || || || ||| |||| Sbjct 27117 ---AATACCCACAGAAACACGCATGATCATGTGTTGTGGGCGCTCAACAATCTT 27067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927386507840