Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq9 96.9 4e-15
>seq9
Length=4851470
Score = 96.9 bits (106), Expect = 4e-15
Identities = 177/257 (69%), Gaps = 3/257 (1%)
Strand=Plus/Minus
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||| |||||||| || ||||| || || |||||||| |||||||| | |
Sbjct 3450332 TCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGACC 3450273
Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621
|| || || || | || || || ||||||||||||| ||||||||||| ||| ||
Sbjct 3450272 TGGACCTCGCCGGAGAAGCGCTCGACCAGGTTCTCATTGACGATACCGTCCGATGCGGCG 3450213
Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA--GATG-TAAGAATATGCCAA 16678
|| || || | ||||| ||||| || || || ||| | || | | | |||
Sbjct 3450212 AAGAAGGCAAGAATGTGAGAGATGAAGTACTTCTCATCATCGTTGATCTTGTTGTTCCAG 3450153
Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738
|| | | ||| ||||| | ||| | || || | ||||| ||| |||| | |||||
Sbjct 3450152 TCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTC 3450093
Query 16739 TTATACATTTTCCAAAT 16755
|| ||||||| ||| ||
Sbjct 3450092 TTGTACATTTGCCAGAT 3450076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414182648880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |