Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 4e-15 >seq9 Length=4851470 Score = 96.9 bits (106), Expect = 4e-15 Identities = 177/257 (69%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || || |||||||| |||||||| | | Sbjct 3450332 TCAGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCAGGGACC 3450273 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || || | || || || ||||||||||||| ||||||||||| ||| || Sbjct 3450272 TGGACCTCGCCGGAGAAGCGCTCGACCAGGTTCTCATTGACGATACCGTCCGATGCGGCG 3450213 Query 16622 AAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCA--GATG-TAAGAATATGCCAA 16678 || || || | ||||| ||||| || || || ||| | || | | | ||| Sbjct 3450212 AAGAAGGCAAGAATGTGAGAGATGAAGTACTTCTCATCATCGTTGATCTTGTTGTTCCAG 3450153 Query 16679 TCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTT 16738 || | | ||| ||||| | ||| | || || | ||||| ||| |||| | ||||| Sbjct 3450152 TCGTGGAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTC 3450093 Query 16739 TTATACATTTTCCAAAT 16755 || ||||||| ||| || Sbjct 3450092 TTGTACATTTGCCAGAT 3450076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414182648880