Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq15 188 8e-43 >seq15 Length=3115873 Score = 188 bits (208), Expect = 8e-43 Identities = 374/556 (67%), Gaps = 56/556 (10%) Strand=Plus/Plus Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719 |||||| | || ||||| | ||| || | |||||||||| ||||||||||||||| Sbjct 414065 GGCTCCCGCTCCAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTAGACGTGCGCGTCG 414124 Query 145720 CCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778 |||| |||||| ||| | | ||||| | | | | | | || | ||||| || Sbjct 414125 CCCATGACGTGCGTGAGGCTTCCCGGTACCAAATCGCACGCCC-GCGCAATCATGTGCGT 414183 Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838 || || | ||||||||| ||||||||||||||||| || |||||||| | || ||||| Sbjct 414184 GAGGAGCGCGTAGCTGGCAATGTTGAAGGGCACCCCGAGTCCCATGTCGCAAGACCGCTG 414243 Query 145839 GTACAGCTGGCAGGAGAG---------------CTCCCCGC--------------CCGCC 145869 ||||| ||||||| ||| |||| || |||| Sbjct 414244 GTACAACTGGCAGTGGAGGTGGCCCTTTGGCTTCTCCTCGTTTGCGGGCGTGGCACCGCG 414303 Query 145870 ----------------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGG 145912 || || ||||| ||| | | |||||| ||||| || ||||| Sbjct 414304 GGCTCGCGGGTACGAGACATAAAACTGCGCAAAC-ATGTGGCACGGCGGGAGCGCCATCT 414362 Query 145913 CGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCC 145969 ||| ||||| |||||||| ||| |||||| || | | || ||| |||||| Sbjct 414363 TCTTCAGATCCGCTGGGTTCCATGCGCTGAGGAGGA---TGCGGCGGTCGTAAGGGTTCG 414419 Query 145970 TCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCT 146029 |||||| || || | || || ||||| |||||||| ||| |||||| |||| Sbjct 414420 TCTTGAGCTTGTGGATGACCTCGGCCAGTTGGTCGACGCCCTGGCCCGTGTAATCCGTCT 414479 Query 146030 TGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089 ||||||| |||||| |||| || ||||| | ||| ||||| ||||| ||||| || |||| Sbjct 414480 TGGAGTCGACGTACTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGGCCGAGGT 414539 Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149 | ||| || | ||| || ||| | | | ||||||| || || || |||||| ||| Sbjct 414540 CGCCGACTTCGCGGTGGGAGAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGT 414599 Query 146150 CCCAGATCTTGACGCC 146165 |||||||||||||||| Sbjct 414600 CCCAGATCTTGACGCC 414615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076549217360