Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq15 188 8e-43
>seq15
Length=3115873
Score = 188 bits (208), Expect = 8e-43
Identities = 374/556 (67%), Gaps = 56/556 (10%)
Strand=Plus/Plus
Query 145661 GGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCC 145719
|||||| | || ||||| | ||| || | |||||||||| |||||||||||||||
Sbjct 414065 GGCTCCCGCTCCAGCTGCACCTTGAGCGCGTCCACGTGGTCCGCGTAGACGTGCGCGTCG 414124
Query 145720 CCCAGGACGTGGATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGT 145778
|||| |||||| ||| | | ||||| | | | | | | || | ||||| ||
Sbjct 414125 CCCATGACGTGCGTGAGGCTTCCCGGTACCAAATCGCACGCCC-GCGCAATCATGTGCGT 414183
Query 145779 CAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTG 145838
|| || | ||||||||| ||||||||||||||||| || |||||||| | || |||||
Sbjct 414184 GAGGAGCGCGTAGCTGGCAATGTTGAAGGGCACCCCGAGTCCCATGTCGCAAGACCGCTG 414243
Query 145839 GTACAGCTGGCAGGAGAG---------------CTCCCCGC--------------CCGCC 145869
||||| ||||||| ||| |||| || ||||
Sbjct 414244 GTACAACTGGCAGTGGAGGTGGCCCTTTGGCTTCTCCTCGTTTGCGGGCGTGGCACCGCG 414303
Query 145870 ----------------ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGG 145912
|| || ||||| ||| | | |||||| ||||| || |||||
Sbjct 414304 GGCTCGCGGGTACGAGACATAAAACTGCGCAAAC-ATGTGGCACGGCGGGAGCGCCATCT 414362
Query 145913 CGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCC 145969
||| ||||| |||||||| ||| |||||| || | | || ||| ||||||
Sbjct 414363 TCTTCAGATCCGCTGGGTTCCATGCGCTGAGGAGGA---TGCGGCGGTCGTAAGGGTTCG 414419
Query 145970 TCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCT 146029
|||||| || || | || || ||||| |||||||| ||| |||||| ||||
Sbjct 414420 TCTTGAGCTTGTGGATGACCTCGGCCAGTTGGTCGACGCCCTGGCCCGTGTAATCCGTCT 414479
Query 146030 TGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGT 146089
||||||| |||||| |||| || ||||| | ||| ||||| ||||| ||||| || ||||
Sbjct 414480 TGGAGTCGACGTACTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGGCCGAGGT 414539
Query 146090 CCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGT 146149
| ||| || | ||| || ||| | | | ||||||| || || || |||||| |||
Sbjct 414540 CGCCGACTTCGCGGTGGGAGAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGT 414599
Query 146150 CCCAGATCTTGACGCC 146165
||||||||||||||||
Sbjct 414600 CCCAGATCTTGACGCC 414615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076549217360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |