Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6 87.8 2e-12 >seq6 Length=6290098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || || | ||| | || | ||| | || ||||| || || |||||||||||| Sbjct 607840 TGGCCGCCACGAAGACGGAGGACCAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCG 607781 Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074 |||| |||| ||||| || || || ||||| |||| ||||| ||||| || || Sbjct 607780 CTCAGAGTGCGACCATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGG 607721 Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134 || || || || ||||| || || || | | || | |||||| | | || Sbjct 607720 GGAATACCCTCCTTGTCCTGGATCTTGGACTTCACATTATCAATCGTGTCAGATGACTCG 607661 Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 ||||| | || | |||||| || |||| || || ||||| || |||||| Sbjct 607660 ACTTCCAATGTAATCGTCTTTCCAGTCAGCGTCTTGACGAAGATCTGCATA 607610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014184518880