Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq17 98.7 9e-16
>seq17
Length=2392175
Score = 98.7 bits (108), Expect = 9e-16
Identities = 186/270 (69%), Gaps = 8/270 (3%)
Strand=Plus/Plus
Query 99502 CGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCGAGGTG 99561
||| ||||||| || ||||||| ||| || | | | |||||| || || | |||
Sbjct 1120205 CGCTCCCAGCCGCGGTTGGCGTGGGAGTTCGCCTCGTGGGCCCGCACCGTCAGGCACGTG 1120264
Query 99562 TTGAGCAGCAGCACGCCGCGGCGCGCCCAGGCCTCCAGGCAGCCG----TGCTGCGGCCG 99617
||||| || || ||||||||| ||||||| |||| |||| || || || |
Sbjct 1120265 TTGAGGAGGAGGACGCCGCGGTCGGCCCAGGGGGTCAGGAGGCCGCCCTTGTTGGGGG-G 1120323
Query 99618 CGGGGTCCCGG--GGA-AGTTCTTCTGCACGGCCGCGTAGATGTTCTGGAGGCTGGGCGG 99674
||||| || ||| ||| ||||| || ||| ||| ||||||| ||| ||| ||
Sbjct 1120324 CGGGGAGAAGGAAGGATAGTCCTTCTTCAGGGCGATGTACATGTTCTTGAGAGAGGGGGG 1120383
Query 99675 GATCGGAACGCCGCGGTTCACGCTGAAGGCCAGGCCGTGGGCCTGCCCGTGGCTGTGGTA 99734
||| | || ||| |||||| || ||||||||||| | |||||||
Sbjct 1120384 CGCCGGGGTGGGCGGGCGGACGGAGAAGGCGAGACCGTGGGCCTGGTTTACGTTGTGGTA 1120443
Query 99735 GGGGTCCTGGCCCAGGATGACGACCTTGAC 99764
|||||| ||||| |||||||||||||||||
Sbjct 1120444 GGGGTCTTGGCCGAGGATGACGACCTTGAC 1120473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440899012617840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |