Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 4e-34
seq9 120 4e-22
seq8 91.5 2e-13
>seq6
Length=6290098
Score = 159 bits (176), Expect = 4e-34
Identities = 1133/1812 (63%), Gaps = 67/1812 (4%)
Strand=Plus/Plus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| ||||||||||| || |||||||| | | ||||| ||
Sbjct 2838193 CGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCGGCGAAGTGCATACTGGTG 2838252
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | ||| || | |||| || ||| | ||||| || |||||||||
Sbjct 2838253 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTAAGGGACTGGGACTGGTCGATGAAG 2838312
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
||||| || || ||||| | || || | | || | || ||||| || ||
Sbjct 2838313 GCACCACGGTCGGCAGCCATCTGAA---CAACGGTGCGCTGGGAGATCTCCCAAACGGTC 2838369
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| | ||| | || || | ||| || ||||| || ||| |
Sbjct 2838370 TTGTACAGAGCCTTGACCTCAGCGGGAATGTTGGGGATGTTCTGGATAGA---ACCGTTC 2838426
Query 113834 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
| | | |||| | | |||||| | | ||||| || || || | |||||||| |
Sbjct 2838427 TCGGCGATGATACGGTTCTTCATGGCATCGGACCACAGGCCCATGTCGACGAGATCCTTC 2838486
Query 113891 A----CGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGAT 113946
| | || | |||||||| ||||| || || || || | | |||||
Sbjct 2838487 AACAACCAGGGG----TTGACAACCTGGAACTCGCCGGCAAGAACACGACGTTGGTAGAT 2838542
Query 113947 ATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGT 114006
|||| ||||| ||||| |||||||| ||||| |||||||| || | |||||||| ||
Sbjct 2838543 GTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGCGAAGTGGAGGCAGT 2838602
Query 114007 GGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAG 114066
|||||||| || | ||| | ||||| || | ||| | ||| | || | ||||| ||
Sbjct 2838603 AGGCATGGGAGCAACGAGCAAACTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTCAG 2838662
Query 114067 GGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACC 114126
| |||||| || || | | || | | |||||| || |||||||||||||
Sbjct 2838663 TGAGTCCCAATCCCAGAGGTCAGAGGGCTTGACATTCCACATGTCGTACTGGAGGATACC 2838722
Query 114127 TTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGA 114186
|||||| || || ||||| | || ||| | |||||| ||| |||| | ||
Sbjct 2838723 CTGGGAGATAGGGGAGCCCTCGTACGTGGAGTAGGTGCCCTCCTCCTTGGCCA--GCTGA 2838780
Query 114187 GCTCGCCTCG--AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTG 114244
| | | | || || ||||| || || ||||| || || || | | |
Sbjct 2838781 ACAGACATGGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTGAGATCACGG 2838840
Query 114245 GCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304
||||| || || || | | || | || |||| || ||||| ||||||
Sbjct 2838841 GCCTCAGGAGACTCGAAAGGCATGCGAAGGGCGAGGAAAGCATCAGCAAGACCCTGGACA 2838900
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAA 114361
|| || ||||| ||||| || | ||| || || ||||| ||| ||||| ||
Sbjct 2838901 CCAAGACCAATGGGGCGGTGACGCATGTTGCTGTTGCGAGC---CTCGGGAACGGGGTAG 2838957
Query 114362 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 114421
|| ||| || | | | || | || || |||| || | || ||||||
Sbjct 2838958 TGGTTGACATCAATGATCTTGTTCAAGTTGCGAACAACGACCTGAGTAACCTCGTGAAGC 2839017
Query 114422 TTTTCGTAATC----AAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 114477
|| | | | || | | | || | | ||| || | | || || || | ||
Sbjct 2839018 TTCTGGAAGTCGTAGACACCATCG-TTGTAGTCA---ACGAAGGTGGGCAGAGCAAGGGA 2839073
Query 114478 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAA 114537
|||| || || |||| | |||||| | |||||| || || || || || |
Sbjct 2839074 AGCCAAGTTGCAGACAGCGACCTCATCGGGTGCGCAGTACTCAATGATCTCAGTGCAAAG 2839133
Query 114538 ATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 114597
|| || || || || || | |||||| || || ||| ||| ||||||||
Sbjct 2839134 GTTGGAGCTGCGGATAGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGGCAGCATCCTT 2839193
Query 114598 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 114656
|||||||||| | || | || ||||| || || | || ||| || || | ||| | | |
Sbjct 2839194 GTAAAGCATGAAGGGGTTGCCAGTCTCGGTCTGAGCCTCGAGGATGGCATACCAAAGCTT 2839253
Query 114657 CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGA 114710
| | | || | ||| ||| || |||| |||| ||||||||| ||| |
Sbjct 2839254 CTGGGCCTTG----ATGGTCTTG---CGACCCTTGCCCTCGCGCTCGTACTTCTCGTACA 2839306
Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770
||| || ||||| || || | || | || || || || || ||||| | ||
Sbjct 2839307 AGGCCTCGAACTCCTCGCCATAGCAGTCAGCCAGGCCAGGGCACTCATTGGGGCACATGA 2839366
Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830
| | ||| | | || ||| || | ||||||||| || || ||||||||||||||
Sbjct 2839367 GGGTCCAGTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGAGCGA 2839426
Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890
||| || || || || | || || | || || || ||||| |||| || |
Sbjct 2839427 GGAAAAGGTCACGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGCAAGTCCATGAACT 2839486
Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG----- 114945
| | || || ||||||||||| || ||||| | |||| | || | ||||
Sbjct 2839487 CGAAGACGTCGGCGTGCCACGGCTCAAGGTAAATAGCGAAAGCGCC---AGGACGCTTGT 2839543
Query 114946 -ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004
||| |||||| || || | || ||| ||||| || |||||||| ||||||| ||
Sbjct 2839544 TGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTAAAGACACGAAGCATGGGAATGACAC 2839603
Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGT 115064
| | || ||| || || || |||| || | |||| | | | || ||
Sbjct 2839604 CGTTCGAGGTGCCGTTGGTGCCGGCAATATAGGAGCCAGTGGCACGAATACGGTGAGCGT 2839663
Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124
| |||||| || || ||| ||| ||||| ||||| | |||| || ||||||
Sbjct 2839664 TGAGACCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGA 2839723
Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184
| || || || ||||| |||| | ||| |||||||| |||| || | |
Sbjct 2839724 TACCCTCAATAGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAG 2839783
Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTT 115242
| ||||||||||||||||| || || | || ||| ||| | | |||| ||||||
Sbjct 2839784 GGGTACCAGCGTTGAAGAGTGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATGAG 2839841
Query 115243 ATCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCA 115301
| ||||||||| | |||| || | | || || || || |||| | || ||||
Sbjct 2839842 GTTGTAGGTCTCGATGACGCGCTCG-ACGTTATCACCCCAGATGCCGACTGCAACACGCA 2839900
Query 115302 TAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCT 115361
| | ||||| |||||| | || | | ||||| ||| | | ||||| |||
Sbjct 2839901 TGATCATGTGCTGGGGTCTCTCGGCAATCTTGCCATCAAGCTTGAGCAGGTATGATCTCT 2839960
Query 115362 CCAAGGTCTTGA 115373
||| ||||||||
Sbjct 2839961 CCAGGGTCTTGA 2839972
>seq9
Length=4851470
Score = 120 bits (132), Expect = 4e-22
Identities = 303/456 (66%), Gaps = 10/456 (2%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| | || |||||||| |||||||| ||||| ||| | | | ||| ||||||||
Sbjct 3450971 GTAGTCAGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 3450912
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875
|| || || ||||| || || | | |||| | || | | |||||
Sbjct 3450911 GAAGTCGAAGGGGTTGGAGGACTTGTAGACCTTGTCGTTGCCAAGAGCGACC--AGGAGG 3450854
Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935
|| || | ||| |||||||||||| |||| | |||||||| |||| ||
Sbjct 3450853 CGGTCGGCAACGAACTCAATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGAGCG 3450794
Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995
|| || || || || || |||| ||| |||||| | ||||| || | |||| |
Sbjct 3450793 CAGGGCAGAGCCTCAGTGAGGAACTCCTGCTCAATCTTGACGGCATCAACGATGATGTCC 3450734
Query 125996 TGAATGGTGTCCACCCCAGGTCTAT---TGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052
| |||| | | || | | || | || | ||||| || ||||||
Sbjct 3450733 TCAATGACCTGCTTGTTGGGGCGGTGCTTGAGGTGAGAGTACAAGAGG--CA-GGCAAAG 3450677
Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112
|| ||| ||||||||||||||||||||||| || || |||||| ||| || ||||||
Sbjct 3450676 TCGGTGTGCAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCGGGCATG 3450617
Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172
|| || |||||||| | ||| || || | ||| | ||| ||||||||| |||||
Sbjct 3450616 AGGCCACGCTTCTTGAGCCAAAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCA 3450557
Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAG 126208
||| || || |||| ||||||| || ||||||
Sbjct 3450556 ACAGCGGCAAAGGCAACCAGACGCTGGGCGAAGGAG 3450521
>seq8
Length=5005225
Score = 91.5 bits (100), Expect = 2e-13
Identities = 270/409 (66%), Gaps = 13/409 (3%)
Strand=Plus/Minus
Query 10790 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 10849
|| || || || || || | || || | ||||||||| || | ||| || | |||
Sbjct 2270179 TCGAAACGGCCGGGACGCATCAGCGCCTTGTCAAGGATGTCGGCTCTGTTGGTGCCAGCG 2270120
Query 10850 ATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGA 10907
| |||||| | ||| | || | | | || || |||||||| ||||||| || || |
Sbjct 2270119 AGGACAACAACCTGCTC--CTGGGTGTTGAAACCGTCCATCTCGGTCAAGATCTGGTTCA 2270062
Query 10908 TGGTTTGTTCGCGTTCATCATTCGCGGGCATACC---ACCCGCACTGCGTTGCTT-ACCG 10963
||| |||||| || || || | ||| | |||| | ||| ||| | |||
Sbjct 2270061 GAGTTGCTTCGCGCTCGTCGTTGCCACCCATTCGGTTACCCTC-CTGTCTTGATCGACCA 2270003
Query 10964 ACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAG 11023
| |||||| || ||||||||||| | ||| || || | | | ||||||| ||||
Sbjct 2270002 ATGGCGTCGATCTCATCGATGAAGATGATGCAGGGGGCACTCTTACGGGCATTCGCAAAC 2269943
Query 11024 ATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGG--CGGCGG 11081
| ||||| ||||| | ||||||||| |||||||| || ||||| | || | || |
Sbjct 2269942 AGGTCTCGCACTCTTGAAGGACCGACACCGACAAACATCTCGACAAACTCGGAACCGCTG 2269883
Query 11082 AACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCC 11141
| | || |||||| || || || || ||| |||| ||| || | ||||| |
Sbjct 2269882 ACGCT--GAAGAAGGGAACACCAGACTCGCCGGCGGTGGCCTTGGCAAGCAACGTCTTAC 2269825
Query 11142 CCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 11190
| || || || || || || | ||| ||||| |||||| | || ||
Sbjct 2269824 CGGTTCCTGGAGGTCCGGCAAGGATGGCGCCACGAGGGATCTTTGCGCC 2269776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597353346124720
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