Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq6 82.4 5e-11
>seq6
Length=6290098
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
||| ||||| || || || || |||||||||||||| ||| | | | ||||| | ||
Sbjct 607814 ATGGAGGGTTGATTCCTTCTGGATGTTGTAATCGCTCAGAGTGCGACCATCTTCCAGCTG 607755
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
|| |||||| | || | |||||| ||||| ||||| || |||||||| || ||
Sbjct 607754 CTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT 607695
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || || || || || ||||| || || || ||
Sbjct 607694 GGACTTCACATTATCAATCGTGTCAGATGACTCGACTTCCAATGTAATCGTCTTTCCAGT 607635
Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177
||| || || || || || ||||||
Sbjct 607634 CAGCGTCTTGACGAAGATCTGCATA 607610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391851905690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |