Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq17 91.5 1e-12 >seq17 Length=2392175 Score = 91.5 bits (100), Expect = 1e-12 Identities = 105/140 (75%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| || || || |||||| || | || |||||||||||||| |||||||| | || Sbjct 1459048 TTAAG-GGCAAGGAGGGTCGTCTTCGTGGCAATTTGATGGGAAAGCGTGTCGACTTTTCG 1459106 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 |||||||| || ||||| |||| |||| | |||| | || ||||||||||||| Sbjct 1459107 GCACGTACTGTCATTACCGGTGATGCCAACTTGTCTCTTGACGAGGTTGGTGTTCCTCGC 1459166 Query 668969 ATTATTGCTAAAAATCTTAC 668988 | ||| || | || ||| || Sbjct 1459167 AGTATCGCAAGAACTCTCAC 1459186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780820712808004