Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=6290098 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || || ||||| || || ||||| ||||| | |||||| Sbjct 607826 ACGGAGGACCAGATGGAGGGTTGATTCCTTCTGGATGTTGTAATCGCTCAGAGTGCGACC 607767 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | | ||||| || || ||||||||||| || Sbjct 607766 ATCTTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 607707 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | |||||||| || ||||| | || || Sbjct 607706 GTCCTGGATCTTGGACTTCACATTATCAATCGTGTCAGATGACTCGACTTCCAATGTAAT 607647 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | || || || || |||||||| Sbjct 607646 CGTCTTTCCAGTCAGCGTCTTGACGAAGATCTGCAT 607611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219040374794