Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 6e-18
seq6 86.0 2e-11
>seq9
Length=4851470
Score = 107 bits (118), Expect = 6e-18
Identities = 124/166 (75%), Gaps = 1/166 (1%)
Strand=Plus/Plus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | |||| || || || ||||| | || || || | || || ||||| ||||
Sbjct 3450524 CTTCGCCCAGCGTCTGGTTGCCTTTGCCGCTGTTGAGGGTATCTTCTTCAGCGGT-GCTT 3450582
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| ||||||||||| ||| | || |||||||| || |||| |||||||||||| ||||
Sbjct 3450583 TTGCCTCCATCTTTTGGCTCAAGAAGCGTGGCCTCATGCCCGGTCTGACCTTCTCCAACG 3450642
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
| || ||| || ||||||||| |||| |||||| ||||| ||
Sbjct 3450643 AGCTCATCTCCCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCT 3450688
>seq6
Length=6290098
Score = 86.0 bits (94), Expect = 2e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| | ||||| || |||||| |||||||||||||| || || ||| |||
Sbjct 2839598 ATTCCCATGCTTCGTGTCTTTAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAG 2839539
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082
|| || || || ||| | || ||||| ||||||||||||||||||
Sbjct 2839538 CGTCCTGGCGCTTTCGCTATTTACCTTGAGCCGTGGCACGCCGAC 2839494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335308081130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |