Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq9 109 7e-19
>seq9
Length=4851470
Score = 109 bits (120), Expect = 7e-19
Identities = 151/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| |||||||| || ||||| || || || || |||||| |||||
Sbjct 3450683 GGCAAAGTCGGTGTGCAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACC 3450624
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
|||||||| || |||||||| | |||| | || | | || | ||| |||||||||
Sbjct 3450623 GGGCATGAGGCCACGCTTCTTGAGCCAAAAGATGGAGGCAAAAGCACCGCTGAAGAAGAT 3450564
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC--- 122834
|||||| ||| ||||| |||| || || | |||||||||| || || ||||
Sbjct 3450563 ACCCTCAACAGCGGCAAAGGCAACCAGACGCTGGGCGAAGGAG---GAGTTCTCATCGCT 3450507
Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTT 122864
| ||| |||| ||||| | ||||||||
Sbjct 3450506 GATCCACTTCAGGGCCCAGTCAGCCTTCTT 3450477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031733086400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |