Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq9 109 7e-19 >seq9 Length=4851470 Score = 109 bits (120), Expect = 7e-19 Identities = 151/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| |||||||| || ||||| || || || || |||||| ||||| Sbjct 3450683 GGCAAAGTCGGTGTGCAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACC 3450624 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| || |||||||| | |||| | || | | || | ||| ||||||||| Sbjct 3450623 GGGCATGAGGCCACGCTTCTTGAGCCAAAAGATGGAGGCAAAAGCACCGCTGAAGAAGAT 3450564 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC--- 122834 |||||| ||| ||||| |||| || || | |||||||||| || || |||| Sbjct 3450563 ACCCTCAACAGCGGCAAAGGCAACCAGACGCTGGGCGAAGGAG---GAGTTCTCATCGCT 3450507 Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTT 122864 | ||| |||| ||||| | |||||||| Sbjct 3450506 GATCCACTTCAGGGCCCAGTCAGCCTTCTT 3450477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031733086400