Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03- 18] 34 sequences; 52,129,059 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq15 127 2e-24 >seq15 Length=3115873 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 29589 CCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCA 29648 |||| |||| ||| ||| || ||| ||| ||||||| ||| ||||| | | | | Sbjct 414030 CCCTGTTGTTGATCTCCAGCAGCGGGAAGTCTCTCGGCTCCCGCTCCAGCTGCACCTTGA 414089 Query 29649 GCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCC 29707 ||| ||||||||||| ||||||||| || || |||| | ||| | | || |||| Sbjct 414090 GCGCGTCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCT-TCCC 414148 Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767 ||| | | || | | || ||||||| ||||||||| | ||||||||| ||||| Sbjct 414149 GGTACCAAATCGCACGCCCGCGCAATCATGTGCGTGAGGAGCGCGTAGCTGGCAATGTTG 414208 Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 |||||||||||||| |||||||| | |||| |||||| | |||||| Sbjct 414209 AAGGGCACCCCGAGTCCCATGTCGCAAGACCGCTGGTACAACTGGCA 414255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163031696124