Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001593745.1_202016-03-
18] 34 sequences; 52,129,059 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq15 127 2e-24
>seq15
Length=3115873
Score = 127 bits (140), Expect = 2e-24
Identities = 166/227 (73%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 29589 CCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCA 29648
|||| |||| ||| ||| || ||| ||| ||||||| ||| ||||| | | | |
Sbjct 414030 CCCTGTTGTTGATCTCCAGCAGCGGGAAGTCTCTCGGCTCCCGCTCCAGCTGCACCTTGA 414089
Query 29649 GCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCC 29707
||| ||||||||||| ||||||||| || || |||| | ||| | | || ||||
Sbjct 414090 GCGCGTCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCT-TCCC 414148
Query 29708 GGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTA 29767
||| | | || | | || ||||||| ||||||||| | ||||||||| |||||
Sbjct 414149 GGTACCAAATCGCACGCCCGCGCAATCATGTGCGTGAGGAGCGCGTAGCTGGCAATGTTG 414208
Query 29768 AAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814
|||||||||||||| |||||||| | |||| |||||| | ||||||
Sbjct 414209 AAGGGCACCCCGAGTCCCATGTCGCAAGACCGCTGGTACAACTGGCA 414255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163031696124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |