Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq1593 183 4e-41
>seq1593
Length=35623
Score = 183 bits (202), Expect = 4e-41
Identities = 368/550 (67%), Gaps = 67/550 (12%)
Strand=Plus/Plus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
|| || | ||| || | |||||||||| ||||||||||||||| |||| ||||||
Sbjct 938 AGTTGCACCTTGAGCGCGTCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGC 997
Query 145732 ATGAAG-TCCCCGG-----GCTCG-AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAG 145784
||| | | ||||| | ||| | ||||| | | | ||||| ||||| ||
Sbjct 998 GTGAGGCTTCCCGGTACCAGATCGCACGCCCGCG-------CAATCATGTGTGTCAGGAG 1050
Query 145785 GGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844
| ||||||||| ||||||||||| || || || |||||||| | || |||||||||||
Sbjct 1051 CGCGTAGCTGGCAATGTTGAAGGGTACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAG 1110
Query 145845 CTGGCAGGAGAGCT--CCC----------------------------CGCC--------- 145865
|||||| ||| | ||| ||||
Sbjct 1111 CTGGCAATGGAGGTGGCCCTTTGGCTTCTCCTCATTTGCGAGCGTTGCGCCGCGGGCTCG 1170
Query 145866 ------CGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCA 145918
|| ||||| ||||| ||| | | |||||| ||||| || ||||| ||
Sbjct 1171 CGGGTACGAGACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGGAGCGCCATCTTCTTCA 1229
Query 145919 GGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGA 145975
||||||| || ||||| ||| |||||| || | | || ||| |||||| ||||||
Sbjct 1230 GGTCCGCTGGATTCCACGCGCTGAGGAGGA---TGCGGCGGTCGTAAGGGTTCGTCTTGA 1286
Query 145976 TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGT 146035
|| || | || || ||||| |||||||| ||| |||||| ||||||||||
Sbjct 1287 GCTTGTGGATGACCTCGGCCAGTTGGTCGACGCCCTGGCCCGTGTAATCCGTCTTGGAGT 1346
Query 146036 CCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGG 146095
| |||||| |||| || ||||| | ||| ||||| ||||| ||||| || ||||| |||
Sbjct 1347 CGACGTACTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGGCCGAGGTCGCCGA 1406
Query 146096 GCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGA 146155
|| | ||| || ||| | | | ||||||| || || || |||||| |||||||||
Sbjct 1407 CTTCGCGGTGTGAGAGGCCGACGCTGTCGAGGAACTCGCGCGATCCGTTGCCGTCCCAGA 1466
Query 146156 TCTTGACGCC 146165
||||||||||
Sbjct 1467 TCTTGACGCC 1476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590057519240560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |