Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq719 147 3e-30
>seq719
Length=48969
Score = 147 bits (162), Expect = 3e-30
Identities = 459/704 (65%), Gaps = 14/704 (2%)
Strand=Plus/Plus
Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273
|||| | ||| || |||| || ||||| | | ||| || ||| | || |||| |
Sbjct 16924 CCAAGCCAGGGCACTCATTGGGGCACATGAGGGTCCAGTCGGCGTTCTTCTCGACTCTCT 16983
Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333
|||| || ||||| || ||||| ||||| | || ||||| | | | ||||| |
Sbjct 16984 TCATGAACAGATCGGGGATCCAGAGAGCGAGGAAAAGATCGCGAGCACGGACCTCCTCCT 17043
Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393
| || ||||| | || | |||| | | | ||| | ||||| || || | ||
Sbjct 17044 TGCCGTGGTTCTTGCGCAAGTCCATGAACTCGAAGACATCGGCGTGCCAGGGCTCAAGGT 17103
Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453
| ||||| | | ||||| || ||||| || ||||| || | ||| | ||| ||||| |
Sbjct 17104 AAATGGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGT 17163
Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513
| | || | | ||| ||||| | |||||| ||| |||| ||||| |||| || |||
Sbjct 17164 TGAAGACACGAAGCATGGGAATGACACCGTTCGATGTACCGTTGGTGCCGGCAATGTAGG 17223
Query 63514 CTCCACTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATT 63572
||| | ||||| ||| | | | | ||||| || || || ||||| || |||||
Sbjct 17224 AGCCAGTAGCACGGATACGG-TGAGCGTTGAGACCAATGCCACCAGCCATCTTGGAGATC 17282
Query 63573 AATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGT 63632
| ||||| || | ||||| || || || || || || || |||||| |
Sbjct 17283 ATGGCGCAGGTCTTGAGGGTGTCGTAAATACCCTCAATAGAGTCTTCCTTCATGTCGACG 17342
Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692
|| || || ||||| ||| ||| || || || || || | || || || |||
Sbjct 17343 AGGAAGCATGAAGACAGCTGGCACTGAGGGGTACCAGCGTTGAAGAGTGTGGGGGAGGCG 17402
Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATA----GCT-GAGTCTAT-A 63746
|| || || | || || | || ||||| ||||| || ||| || ||| |
Sbjct 17403 TGGGTGAAGAACTTGCTGGACATGAGGTTGTAGGTCTCGATGACACGCTCGACGTTATCA 17462
Query 63747 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATT 63806
|||| |||| || ||||| |||||||| | ||||||||||||||| || ||||
Sbjct 17463 CCCCA--GATG----CCGACTGCAACACGCATGATCATGTGCTGAGGTCTCTCGGCAATC 17516
Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63866
||| || | || | || ||| ||| | ||||| || || || || || || | |||
Sbjct 17517 TTGCCGTCAAGCTTAAGCAGGTATGATCTCTCCAAGGTCTTGAAGCCGAAGTATTGGTAG 17576
Query 63867 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
||||| || ||||| | ||| | || | ||||| |||||
Sbjct 17577 TTGAAGTCGCGGTCGTAGACAATGGCAGAGTCGAGCTCTTCCTT 17620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629797020709920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |