Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq1593 89.7 4e-13
>seq1593
Length=35623
Score = 89.7 bits (98), Expect = 4e-13
Identities = 119/164 (73%), Gaps = 6/164 (4%)
Strand=Plus/Plus
Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990
|| ||||||| ||| ||||| ||||| |||| | |||| | | |||||| |
Sbjct 956 TCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTTCCCGGTACC 1015
Query 20991 AG---GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047
|| || || | | || |||| | |||||||| ||||||||||| ||||| ||
Sbjct 1016 AGATCGCACG---CCCGCGCAATCATGTGTGTCAGGAGCGCGTAGCTGGCAATGTTGAAG 1072
Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCA 21091
|| || ||||| ||||||||| ||||| |||||||||||||||
Sbjct 1073 GGTACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 1116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427762371858720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |