Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1593 89.7 4e-13 >seq1593 Length=35623 Score = 89.7 bits (98), Expect = 4e-13 Identities = 119/164 (73%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || ||||||| ||| ||||| ||||| |||| | |||| | | |||||| | Sbjct 956 TCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTTCCCGGTACC 1015 Query 20991 AG---GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 || || || | | || |||| | |||||||| ||||||||||| ||||| || Sbjct 1016 AGATCGCACG---CCCGCGCAATCATGTGTGTCAGGAGCGCGTAGCTGGCAATGTTGAAG 1072 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCA 21091 || || ||||| ||||||||| ||||| ||||||||||||||| Sbjct 1073 GGTACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAGCTGGCA 1116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427762371858720