Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1474 96.9 3e-15 >seq1474 Length=13610 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||| || || ||||| || | ||| || || || |||| |||||| ||||| Sbjct 6465 TGCAGGGTTGACTCCTTCTGAATGTTGTAGTCCGACAAAGTGCGACCATCCTCAAGCTGC 6524 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 |||||| | ||||| || | ||||| || ||||||||||| || ||||| | || || Sbjct 6525 TTTCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGAATACCCTCCTTGTCTTGGATCTTC 6584 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 | ||| ||| | | | ||||| | || || || | ||| || || || |||||| Sbjct 6585 GACTTAACGTTGTCAATGGTGTCTGAAGATTCAACCTCGAGCGTAATCGTCTTGCCAGTA 6644 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || |||||||| Sbjct 6645 AGAGTTTTGACGAAAATCTGCAT 6667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448276552085040