Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 86.0 6e-12
>seq1802
Length=45256
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704
||| ||| | ||||| || ||||| || || |||||||| |||| || ||||| | |||
Sbjct 28652 GTAATCGGCGACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGGGAGATGTTCTCCAT 28711
Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAGTCG 119764
|| ||||| || || | || ||| | |||||||| ||| | ||| || || ||
Sbjct 28712 GAAGTCGAAGGGGTTGGAAGACTTGTAGACCTTGTCGTTGCCAAGAGCGACCAGAAGGCG 28771
Query 119765 ATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGCGAC 119824
|| || || ||||||||||| | ||| | | || |||||||| | | ||||
Sbjct 28772 GTCAGCAACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGAAGAGCGCA 28831
Query 119825 CGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA 119874
|| | ||| | || | ||| || | ||||| | ||| || || ||||
Sbjct 28832 GGGCAGAGCCTCAGTCAGGAACTCTTGCTCAATCTTGACGGCATCAACAA 28881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478646759706080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |