Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq719 407 4e-108
>seq719
Length=48969
Score = 407 bits (450), Expect = 4e-108
Identities = 1079/1628 (66%), Gaps = 30/1628 (2%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| | || ||| | | ||| ||||| || | | | ||| |||||||
Sbjct 17410 TTCACCCACGCCTCCCCCACACTCTTCAACGCTGGTACCCCTCAGTGCCAGCTGTCTTCA 17351
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || || || |||||||| | ||||| || ||||
Sbjct 17350 TGCTTCCTCGTCGACATGAAGGAAGACTCTATTGAGGGTATTTACGACACCCTCAAGACC 17291
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
|| || | || ||||||| || || || |||||| | | || || || | | |||||
Sbjct 17290 TGCGCCATGATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGCTC-ACCGTATCCGTGC 17232
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTT 363783
|| | | |||||| |||||| || ||| ||||| || | |||||||||||
Sbjct 17231 TACTGG-CTCCTACATTGCCGGCACCAACGG-TACATCGAACGGTGTCATTCCCATGCTT 17174
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
||||| || |||| ||||| | ||||||||||||||||| ||||| || ||
Sbjct 17173 CGTGTCTTCAACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCC 17114
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
|| || || || || ||||| || |||||| | || ||||| | || | || ||
Sbjct 17113 TTCGCCATTTACCTTGAGCCCTGGCACGCCGATGTCTTCGAGTTCATGGACTTGCGCAAG 17054
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || ||||| | ||||| || ||||| ||| || || ||| | | ||
Sbjct 17053 AACCACGGCAAGGAGGAGGTCCGTGCTCGCGATCTTTTCCTCGCTCTCTGGATCCCCGAT 16994
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAAT 364021
| || |||||| | || ||| | | | | | ||| | ||| | ||||| | || |
Sbjct 16993 CTGTTCATGAAGAGAGTCGAG--AAGAACGCCGACTGGACCCTCATGTGCCCCAATGAGT 16936
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || | | || | || || || | | || | ||||| ||||| |||
Sbjct 16935 GCCCTGGCTTGGCTGACTGCTACGGCGAAGAGTTCGAGGCCTTGTACGAGAAGTACGAAC 16876
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
||||| |||| ||| ||||| || || |||||||| |||| ||||||| | ||
Sbjct 16875 GCGAGGGCAAGGGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTATGCCATCCTTGAGG 16816
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
| |||| ||||| || | |||| ||| | ||||| ||| | |||||||||| ||
Sbjct 16815 CTCAGACCGAGACTGGCAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCA 16756
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260
||||| || |||| || || || | |||| | ||||| || || ||||| ||||| |||
Sbjct 16755 ACCAGAAGAACCTGGGAACCATCC-GCAGCTCCAACCTCTGCACTGAGATCATTGAGTAC 16697
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTA 364320
||||||||| ||| || || || ||| | || || | || || || | || ||
Sbjct 16696 TGCGCTCCCGATGAGGTCGCTGTCTGCAACTTGGCTTCCCTTGCCCTGCCCACCTTCGTT 16637
Query 364321 ------AAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374
|| |||||| | |||| |||| | ||| | || || || | | | |
Sbjct 16636 GACTACAACGATGGTGTCTATGACTTCCAGAAGCTTCACGAGGTCACTCAGGTCGTTGTT 16577
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434
|||| | ||||| | || || || | || || |||| || || |
Sbjct 16576 CGCAACTTGAACAAGATCATTGATGTCAACCACTACCCCGTTCCCGAGGCTCGCAATAGC 16517
Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494
|| |||||||| ||||| |||||||||||||| ||||| || ||||| | ||| |
Sbjct 16516 AACATGCGTCACCGCCCCATTGGTCTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTCGCC 16457
Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554
|| ||| | || || || ||||| || |||| ||| || ||| |||||||||| ||
Sbjct 16456 CTTCGCATGCCTTTCGAGTCTCCTGAGGCCCGTGATCTCAACAAGAAGATCTTTGAGACC 16397
Query 364555 ATGTATTTTGCCGCAATGAC--TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612
|| || || || |||| || | ||| | | |||| || |||| | ||||
Sbjct 16396 ATCTACCACGCTGCTCTGACCATG-TCCGT-TCAGCTGGCCAAGGAGGAGGGCACCTACT 16339
Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672
| || || ||||| |||||| | || ||||| | | |||| || | ||||||||||
Sbjct 16338 CCACGTACGAGGGCTCCCCTATCTCCCAGGGTATCCTTCAGTACGACATGTGGAATGTCA 16279
Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACT 364731
||| |||| | ||| |||||||| | || | | || | ||| |||| |||
Sbjct 16278 AGCCCTCTGATCTTTGGGACTGGGATTCTCTGAAGGAGCAGA-TCAAGGAGCACGGTGTG 16220
Query 364732 CGCAAC---TCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGA 364788
|||||| | |||||| || |||||||| || || || ||| | |||||| | ||
Sbjct 16219 CGCAACAGTTTGCTCGTT---GCCCCCATGCCTACTGCCTCCACTTCGCAGATCTTGGGC 16163
Query 364789 AACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGA 364848
||||||||||||||||| || | || ||| | || || || |||||| ||||
Sbjct 16162 AACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCCGGC 16103
Query 364849 GAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGT 364908
|| || | ||| || || | | | |||||||| |||| || ||||||
Sbjct 16102 GAGTTCCAGGTTGTCAACCCCTGGTTGCTGAAGGATCTCGTCGACATGGGCCTGTGGTCC 16043
Query 364909 GACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTT 364968
|| |||||||||| ||||||||||| || |||||| | |||||||| || ||
Sbjct 16042 GATGCCATGAAGAACCGTATCATCGCCGAGAACGGTTCTATTCAGAACATCCCCAACATT 15983
Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATT 365028
|| | || | ||| || | ||||| || |||||||| || ||| ||| || | |
Sbjct 15982 CCCGCTGAGGTCAAGGCTTTGTACAAGACTGTATGGGAGATCTCCCAGCGCACGGTTGTC 15923
Query 365029 GATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATG 365088
| ||||| ||||| || ||||| || ||| ||| |||||| | ||| | ||||
Sbjct 15922 CAGATGGCTGCCGACCGTGGTGCCTTCATCGACCAGTCCCAGTCCCTCAACATCCACATG 15863
Query 365089 ACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTT 365148
| | || || | |||| | || |||||| ||| ||| ||||| |||||
Sbjct 15862 AAGGACCCGACAATGGGCAAGATCACCAGCATGCACTTCGCCGGCTGGAAGCTTGGTCTC 15803
Query 365149 AAGACAGG 365156
||||| ||
Sbjct 15802 AAGACGGG 15795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303309948244148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |