Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1802 104 5e-17
>seq1802
Length=45256
Score = 104 bits (114), Expect = 5e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| | || ||| ||| | ||||||||||| | | ||| |||||||||||
Sbjct 28843 GAGGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAACTTGATGAAGCAGTACATCGAG 28784
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| || |||||| || | |||| ||||| | || || || ||||| || |||
Sbjct 28783 TTCGTTGCTGACCGCCTTCTGGTCGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAAC 28724
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
||||| | ||| |||||| ||| || ||| || || || |||||||| || ||||||
Sbjct 28723 CCCTTCGACTTCATGGAGAACATCTCCCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGT 28664
Query 243724 GTCAGTGATTATCAA 243738
||| ||||| |||
Sbjct 28663 GTCGCCGATTACCAA 28649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102843062480900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |