Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06-
14] 2,614 sequences; 44,919,977 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq719 307 1e-78
>seq719
Length=48969
Score = 307 bits (340), Expect = 1e-78
Identities = 1112/1718 (65%), Gaps = 40/1718 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || |||||| || ||||| || ||| | || |||
Sbjct 17578 AACTACCAATACTTCGGCTTCAAGACCTTGGAGAGATCATACCTGCTTAAGCTTGACGGC 17519
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| |||| || || || | ||||| || || |||| || || |
Sbjct 17518 AAGATTGCCGAGAGACCTCAGCACATGATCATGCGTGTTGCAGTCGGCATCTGGGGTGAT 17459
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | ||| | | | | || |||| |||| | ||| |||
Sbjct 17458 AACGTCGAGCGTGTCATCGAGACCTACAACCTCATGTCCAGCAAGTTCTTCACCCACGCC 17399
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCG--GTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|||| || || |||||||| || ||||| |||||| | ||||||| || |||||
Sbjct 17398 TCCCCCACACTCTTCAACGCTGGTACCCCTCAGTGCCA--GCTGTCTTCATGCTTCCTCG 17341
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| ||||| || || |||| ||||| ||||||| ||| || |
Sbjct 17340 TCGAC-ATGAAGGAAGACTCTATTGAGGGTATTTACGACACCCTCAAGACCTGCGCCATG 17282
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTT 94069
||||| || || || || || || ||| | ||| |||| ||||| | || |
Sbjct 17281 ATCTCCAAGATGGCTGGTGGCATTGGTCTCAACGCTCAC--CGTATCCGTGCTACTGGCT 17224
Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129
||||||| ||| ||||| || || || ||||| || | || ||||| || |||||||
Sbjct 17223 CCTACATTGCCGGCACCAACGGTACATCGAACGGTGTCATTCCCATGCTTCGTGTCTTCA 17164
Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189
||||| | || |||||||| ||||||||||| | | | ||| | ||||| | |
Sbjct 17163 ACAACACTGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCCTTCGCCATTT 17104
Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249
| || |||||||||||||| || || | ||||| ||| |||| |||||||||||||
Sbjct 17103 ACCTTGAGCCCTGGCACGCCGATGTCTTCGAGTTCATGGACTTGCGCAAGAACCACGGCA 17044
Query 94250 ACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGA 94309
| || || | || | || || ||| |||||||||| | || || || || ||||
Sbjct 17043 AGGAGGAGGTCCGTGCTCGCGATCTTTTCCTCGCTCTCTGGATCCCCGATCTGTTCATGA 16984
Query 94310 AACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT 94369
| | |||||||| ||| ||| ||||| || | || |||||||| || || || ||
Sbjct 16983 AGAGAGTCGAGAAGAACGCCGACTGGACCCTCATGTGCCCCAATGAGTGCCCTGGCTTGG 16924
Query 94370 CCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAG 94428
| ||| | || || || | |||||| | |||||| ||| ||||||||
Sbjct 16923 CTGACTGCTACGGCGAAGAGTTCGAGGCCTTGTACGAGAAGTACGAA-CGCGAGGGCAAG 16865
Query 94429 GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| | ||| ||| | || |||||| ||| || ||| | || | ||| |||
Sbjct 16864 GGTCGCAAGACTATCAAGGCCCAGAAGCTTTGGTATGCCATCCTTGAGGCTCAGACCGAG 16805
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
|| || | |||| ||| | | |||||| | | |||| |||| ||||||| || ||
Sbjct 16804 ACTGGCAACCCCTTCATGCTCTACAAGGATGCCGCCAACCGCAAGAGCAACCAGAAGAAC 16745
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
|| || ||| ||||| || || ||||| ||||| | ||||| |||| ||
Sbjct 16744 CTGGGAACCATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGCGCTCCCGAT 16685
Query 94609 GAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC 94668
||| | ||||| || ||| ||| ||| | |||| |||| ||||| || ||||
Sbjct 16684 GAGGTCGCTGTCTGCAACTTGGCTTCCCTTGCCCTGCCCACCTTCGT------TGACTAC 16631
Query 94669 ACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT- 94727
| | | || | | || | || ||||| | || | ||| | | ||
Sbjct 16630 A--ACGA-TGGTGTCTATGACTTCCAGAAGCTTCACGAGGTCAC--TCAGGTCGTTGTTC 16576
Query 94728 -GAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAA 94786
||| |||||| | | || || ||| ||||||||| || ||||| || |
Sbjct 16575 GCAACTTGAACAAGATCATTGATGTCAACCACTACCCCGTTCCCGAGGCTCGCAATAGCA 16516
Query 94787 ACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGA 94846
|| || || || ||||| || | || ||||||||| | || || || | |
Sbjct 16515 ACATGCGTCACCGCCCCATTGGTCTTGGTGTCCAGGGTCTTGCTGATGCTTTCCTCGCCC 16456
Query 94847 TGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCA 94906
| || |||| | ||| ||| || || | | | || ||| || || || | ||
Sbjct 16455 TTCGCATGCCTTTCGAGTCTCCTGAGGCCCGTGATCTCAACAAGAAGATCTTTGAGACCA 16396
Query 94907 TTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACG 94966
| || ||| || ||| ||||| || |||||| ||| ||| | || |
Sbjct 16395 TCTACCACGCTGCTCTGACCATGTCCGTTCAGCTGGCCAAGGAGGAGGGC-ACCTACTCC 16337
Query 94967 AATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026
| ||| | || || || | ||||| || |||||| |||| | ||| ||| |
Sbjct 16336 A--CGTACGAGGGCTCCCCTATCTCCCAGGGTATCCTTCAGTACGACATGTGGAATGTCA 16279
Query 95027 AGCCCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGT 95084
||||||| | ||| | |||||||| |||| | | || || | | | ||||||||
Sbjct 16278 AGCCCTCTGATCTTTGGGACTGGGATTCTCTGAAGGAGCAGA--TCAAGGAGCACGGTGT 16221
Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144
| ||| |||| || ||||||||||| || |||||||| |||||||| | |||||
Sbjct 16220 GCGCAACAGTTTGCTCGTTGCCCCCATGCCTACTGCCTCCACTTCGCAGATCTTGGGCAA 16161
Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204
|||||||| ||||| |||| |||||||||| | ||| | | || || || ||||| ||
Sbjct 16160 CAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAGCGTCGTGTTCTTGCCGGCGA 16101
Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---G 95260
|||| || ||||| | || ||| || | || | |||| ||||| |
Sbjct 16100 GTTCCAGGTTGTCAACCCCTGGTTGCTGAAGGATCTCGTCGAC-ATGGGCCTGTGGTCCG 16042
Query 95261 GTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAA 95320
|| || | ||||||| | | || ||||| || | ||||||||||| | |
Sbjct 16041 ATGCCA---TGAAGAACCGTATCATCGCCGAGAACGGTTCTATTCAGAACATCCCCAACA 15985
Query 95321 TACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATAC 95380
| || | || ||||||| | |||||||| || ||||||||| | |||||| | |
Sbjct 15984 TTCCCGCTGAGGTCAAGGCTTTGTACAAGACTGTATGGGAGATCTCCCAGCGCACGGTTG 15925
Query 95381 TCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418
|| | || |||| ||| || |||||||| ||||
Sbjct 15924 TCCAGATGGCTGCCGACCGTGGTGCCTTCATCGACCAG 15887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494707034919440
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