Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20acutatum_20[genbank_20GCA_5F001662755.1_202016-06- 14] 2,614 sequences; 44,919,977 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1474 111 1e-19 >seq1474 Length=13610 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || |||||||| ||||| ||||| ||||| ||||| ||||| | ||| | || ||| Sbjct 6231 ACGAGATGCAGGGTTGACTCCTTCTGGATGTTATAGTCGCTCAGGGTACGACCGTCTTCC 6290 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || ||||| ||| | || | || |||||||| || ||||| || || ||||| ||| Sbjct 6291 AACTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGAATACCCTCCTTATCCTGA 6350 Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || || | || | || | ||||| || ||||||||||| | |||| ||| || Sbjct 6351 ATCTTGGACTTCA-CGTTATCAATCGTGTCAGATGACTCGACTTCCAACGTAATCGTCTT 6409 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || | || || || || || ||||| Sbjct 6410 GCCAGTCAACGTCTTGACGAAGATCTGCAT 6439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988430795440